Job Description P77439 Confidence 68.03% Date Thu Jan 5 12:29:20 GMT 2012 Rank 122 Aligned Residues 224 % Identity 17% Template c3bo9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative nitroalkan dioxygenase; PDBTitle: crystal structure of putative nitroalkan dioxygenase (tm0800) from2 thermotoga maritima at 2.71 a resolution Resolution 2.71 Å

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		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320					.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		I	L	V	A	E	D	L	T	P	S	Q	F	L	S	L	D	L	K	N	L	A	G	M	I	L	E	K	T	G	R	T	S	H	T	L	I	L	A	R	A	S	A	I	P	V	L	S	G	L	P	L	D	A	I	A	.	.	.	.	R	Y	A	G	Q	P	A	V	L	D	A	Q	C	G	V	L	A	I	N	P	N
Query Conservation																																																									.	.	.	.
Alig confidence																																							.																		.	.	.	.
Template Conservation																																							.
Template Sequence		I	I	L	V	S	P	W	A	D	D	L	V	K	V	C	I	E	E	K	V	P	V	V	T	F	G	A	G	N	P	T	K	Y	I	R	E	L	.	K	E	N	G	T	K	V	I	P	V	V	A	S	D	S	L	A	R	X	V	E	R	A	G	A	D	A	V	I	A	E	G	X	E	S	G	G	H	I	G	E	V
Template Known Secondary structure				T	T	S	T	T											T	T		S						S	S										.			T	T								S	S										T	T		S							T	T	S	S					S	S
Template Predicted Secondary structure																																							.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	V	S	G	Y	Y	Q	V	A	Q	T	L	A	D	K	R	Q	K	Q	Q	A	Q	A	A	A	Q	L	A	Y	S	R	D	N	K	R	I	D	I	A	A	N	I	G	T	A	L	E	A	P	G	A	F	A	N	G	A	E	G	V	G	L	F	R	T	E	M	L	Y	M	D	R	D	S	A	P	D	E	Q	E
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.																		.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.																		.	.
Template Sequence		T	T	F	V	L	V	N	K	V	S	R	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	P	V	I	A	A	G	G	I	A	D	G	R	G	X	A	A	A	F	A	L	G	A	E	A	V	.	Q	X	G	T	R	F	V	A	S	V	E	S	D	V	H	P	V	.	.
Template Known Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S						S	S			S											T		S			.			S					T	B	S	S			S				.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.																		.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.																					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	F	E	A	Y	Q	Q	V	L	L	A	A	G	D	K	P	I	I	F	R	T	M	D	I	G	G	D	K	S	I	P	Y	L	N	I	P	Q	E	E	N	P	F	L	G	Y	R	A	V	R	I	Y	P	E	F	A	G	L	F	R	T	Q	L	R	A	I	L	R	A	A	S	F	G	N	A	Q	L	M	I	P	M
Query Conservation
Alig confidence		.	.	.	.																						.	.							.	.	.	.	.
Template Conservation		.	.	.	.																						.	.							.	.	.	.	.
Template Sequence		.	.	.	.	Y	K	E	K	I	V	K	A	S	I	R	D	T	V	V	T	G	A	K	L	G	.	.	H	P	A	R	V	L	.	.	.	.	.	R	T	P	F	A	R	K	I	Q	E	X	E	F	E	N	P	X	Q	A	E	E	X	L	V	G	S	L	R	R	A	V	V	E	G	D	L	E	R	G	S	F	X
Template Known Secondary structure		.	.	.	.										T	T							T	T	T	T	.	.							.	.	.	.	.																								T	T											T	T	T				B
Template Predicted Secondary structure		.	.	.	.																						.	.							.	.	.	.	.
Template SS confidence
						208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.						.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		502	.					.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		V	H	.	.	.	.	S	L	D	Q	I	L	W	V	K	G	E	I	Q	K	A	I	V	E	L	K	R
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.
Template Conservation
Template Sequence		V	G	Q	S	A	G	L	I	D	E	I	K	P	V	K	Q	I	I	E	D	I	L	K	E	F	K	E
Template Known Secondary structure				G	G	G	G	G			S		B
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions