Job Description P77439 Confidence 24.68% Date Thu Jan 5 12:29:20 GMT 2012 Rank 208 Aligned Residues 42 % Identity 19% Template c3bmbB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:regulator of nucleoside diphosphate kinase; PDBTitle: crystal structure of a new rna polymerase interacting2 protein Resolution 1.91 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Query Sequence		Q	W	Q	S	E	I	T	F	I	N	H	R	Q	N	A	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	K	S	S	L	A	L	I	G	T	G	T	L	F	N	D	S	C	S	L	N	I	.	S	G
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation
Template Sequence		T	M	N	S	R	V	K	F	R	N	L	S	D	G	E	V	R	V	R	T	L	V	Y	P	A	K	M	T	D	S	N	T	Q	L	S	V	M	A	P	V	G	A	A	L	L	G	L	R	V	G	D	S	I	H	W	E	L	P	G	G
Template Known Secondary structure			T	T								T	T	T											G	G	G				T	T	T				T	T	S							T	T		B	T	T								T	T	T
Template Predicted Secondary structure
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions