Job Description P77439 Confidence 27.87% Date Thu Jan 5 12:29:20 GMT 2012 Rank 197 Aligned Residues 71 % Identity 11% Template c2zkrr_ PDB info PDB header:ribosomal protein/rna Chain: R: PDB Molecule:rna expansion segment es39 part i; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map Resolution 8.70 Å

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		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.																																.	.	.	.	.	670	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	L	S	M	S	S	P	R	I	P	A	V	K	S	Q	L	R	Q	L	D	S	E	A	C	R	E	L	A	R	Q	A	C	E	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	A	Q	E	I	E	A	L	L	T	A	F	T
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	N	L	R	V	H	F	K	N	T	R	E	T	A	Q	A	I	K	G	M	H	I	R	K	A	T	K	Y	L	K	D	V	T	L	Q	K	Q	C	V	P	F	R	R	Y	N	G	G	V	G	R	C	A	Q	A	K	Q	W	G	W	T	Q	G	R	W	P	K	K	S	A	E	F	L	L	H	M	L	K	N	A	E
Template Known Secondary structure			S			S													T	T	S	B														T	S	S					S	S	S		T	T			B			S	T	T	S		S		S	B
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		679	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	E	D	V	R	P	L	L	A	L	E	N	I	F	V	D	Q	D	F	S	N	K
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		S	N	A	E	L	K	.	G	L	D	V	D	S	L	V	I	E	H	I	Q	V	N	A
Template Known Secondary structure								.	T	S		T	T	T
Template Predicted Secondary structure								.
Template SS confidence
		100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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