Job Description P77439 Confidence 99.76% Date Thu Jan 5 12:29:20 GMT 2012 Rank 38 Aligned Residues 206 % Identity 19% Template c2v5jB_ PDB info PDB header:lyase Chain: B: PDB Molecule:2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PDBTitle: apo class ii aldolase hpch Resolution 1.60 Å

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		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	R	I	D	I	A	A	N	I	G	T	A	L	E	A	P	G	A	F	A	N	G	A	E	G	V	G	L	F	R	T	E	M	L	Y	M	D	R	D	S	A	P	D	E	Q	E	Q	F	E	A	Y	Q	Q	V	L	L	A	A	G	D	K	P	I	I	F	R	T	M	D	I	G	G	D	K	S	I	P	Y	L
Query Conservation
Alig confidence																													.						.	.	.	.	.	.																	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.						.	.	.	.	.	.																	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	Q	I	G	L	W	L	G	L	S	S	S	Y	S	A	E	L	L	A	G	A	G	F	D	W	L	.	L	I	D	G	E	.	.	.	.	.	.	H	A	P	N	N	V	Q	T	V	L	T	Q	L	Q	A	I	.	.	A	P	Y	P	S	Q	P	V	V	R	P	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											S											T	S			S			.				T	T	.	.	.	.	.	.	T	S	S														.	.	T	T	S	S	S							.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.						.	.	.	.	.	.																	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.							.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	P	Q	E	E	N	P	F	L	G	Y	R	A	V	R	I	Y	P	E	F	A	G	L	F	R	T	Q	L	R	A	I	L	R	A	A	S	F	G	N	A	Q	L	M	I	P	M	V	H	S	L	D	Q	I	L	W	V	K	G	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	N	D	P	V	Q	I	K	Q	L	L	D	V	G	T	Q	T	.	.	.	L	L	V	P	M	V	Q	N	A	D	E	A	R	E	A	V	R	A	T	R	Y	P	P	A	G	I	R	G	V	G	S	A	L	A	R	A	S	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S											T	T				.	.	.				S				S											T	S		T	T	T					G	G	G	T	T	T	G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Template SS confidence
																							72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
						516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.			.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																					.	.
Query SS confidence		.	.	.	.																																					.	.
Query Sequence		.	.	.	.	Q	K	A	I	V	E	L	K	R	D	G	L	R	H	A	E	T	I	T	L	G	I	M	V	E	V	P	S	V	C	Y	I	I	D	H	F	.	.	C	D	E	V	D	F	F	S	I	G	S	N	D	M	T	Q	Y	L	Y	A	V	D	R	N	N	P	R	V	S	P	L	Y	N	P	I	T	P	S
Query Conservation		.	.	.	.																																					.	.
Alig confidence		.	.	.	.											.	.	.	.	.	.	.																				.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		W	N	R	I	P	D	Y	L	Q	K	A	N	D	Q	.	.	.	.	.	.	.	M	C	V	L	V	Q	I	E	T	R	E	A	M	K	N	L	P	Q	I	L	D	V	E	G	V	D	G	V	F	I	G	P	A	D	L	S	A	D	M	.	.	.	.	.	.	.	.	.	.	G	Y	A	G	N	P	Q	H	P	E
Template Known Secondary structure		T	T	T	S	T	T									.	.	.	.	.	.	.									S						T						T	S	T	T															T	.	.	.	.	.	.	.	.	.	.	T	S	T	T				S
Template Predicted Secondary structure																.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.								.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180											.	.	.	.	.	.	.	.	.	190
		590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	R	M	L	Q	Q	I	V	T	T	A	H	Q	R	G	K	W	V	G	I	C	G	E	L	G	G	E	S	R	Y	L	P	L	L	L	G	L	G	L	D	E	L	S	M	S	S	P	R	I	P	A	V	K	S	Q
Query Conservation
Alig confidence																				.	.	.
Template Conservation																				.	.	.
Template Sequence		V	Q	A	A	I	E	Q	A	I	V	Q	I	R	E	S	G	K	A	.	.	.	P	G	I	L	I	A	N	E	Q	L	A	K	R	Y	L	E	L	G	A	L	F	V	A	V	G	V	D	T	T	L	L	A	R	A	A
Template Known Secondary structure																T	T	S		.	.	.																	T	T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions