|   |
380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | |
. | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
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|  |  |  |  |
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Query SS confidence |   |
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| . |
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|
Query Sequence |   |
I | A | A | N | I | G | T | A | L | E | A | P | G | A | F | A | N | G | A | E | G | V | G | L | F | R | T | E | M | L | Y | M | D | R | D | S | A | P | D | E | Q | E | Q | F | E | A | Y | Q | Q | V | L | L | . |
A | A | G | D | K | P | I | I | F | R | T | M | D | I | G | G | D | K | S | I | P | Y | L | N | I | P | Q |
Query Conservation |   |
|   |
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|   |   |   |   |
|   |   |   |
|   |   |   |
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|   |
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|   |   |   |   |   |
|   |
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|   |   |   |
|   |   |
|   |   | . |   |   |   |
|   |
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|   |   |   |
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|   |   |   |   |
Alig confidence |   |
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| . |
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| . | . | . | . | . | . |
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| . | . |
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| . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |
|
|   |   |   |   |   |   |   |   |   |
| . |   |   |
|
|
|   |
| . | . | . | . | . | . |
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|   |   |   |   |
|   |   |
|
| . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
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|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
L | F | C | P | A | D | A | P | E | A | F | A | A | A | . |
A | A | A | A | D | V | V | . |
. |
. |
. |
. |
. |
I | L | D | L | E | D | G | V | A | A | A | Q | K | P | A | A | R | . |
. |
N | A | L | R | D | T | P | L | D | P | E | R | T | V | V | R | I | N | A | G | G | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  | T | T |
| G | G | G |  |  |  |  | . |  |  |  |
| S |  |  | . | . | . | . | . | . |  |  |  | S | S | T | T | S |
| G | G | G |  |  |  |  |  | . | . |  |  |  |  |  | S |
|
|
| G | G | G |  |  |  |  |
|
|
| T | T |
| . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |
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|  |  |  |  |  |  |  | . |
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|  |  | . | . | . | . | . | . |  |  |  |
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|  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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| . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
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  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | |
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. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | |
|
. | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
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  |
  |   |
459 | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
E | E | N | P | F | L | G | Y | R | A | V | R | I | Y | P | E | F | A | G | L | F | R | T | Q | L | R | A | I | L | R | A | A | S | F | G | N | A | Q | L | M | I | P | M | V | H | S | L | D | Q | I | L | W | V | K | G | E | I | Q | K | A | I | V | E | L | K | R | D | G | L | R | H | A | E | T | I | T | L | G | I | M |
Query Conservation |   |
|   |
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|   |   |
|   |
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|   |   |
|   |
|   |
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|   |
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|   |   |   |
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|   |   |
|   |
|   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |
|
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|
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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|
Template Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|
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|
|
|   |
|   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | D | Q | A | R | D | L | E | A | L | A | G | T | A | Y | T | T | V | M | L | P | K | A | E | S | A | A | Q | V | I | E | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | P | R | D | V | I | A | L |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
|  |  |  |  | T | T |
|
|
|  |  |  |  |  | T | T | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | S |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |
|
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|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
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  |   |
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|
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
|
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|
|
. | . | . | . | . | . | . | 110 |
  |
  |   |
539 | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | |
|
. | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | |
|
. | 610 | . | . | |
|
Predicted Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  | . | . |  |  |  |
| . | . |
Query SS confidence |   |
|
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|
|
| . |
. |
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| . |
. |
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|
| . |
. |
Query Sequence |   |
V | E | V | P | S | V | C | Y | I | I | D | H | F | C | D | E | . |
. |
V | D | F | F | S | I | G | S | N | D | M | T | Q | Y | L | Y | A | V | D | R | N | N | P | R | V | S | P | L | Y | N | P | I | T | P | S | F | L | R | M | L | Q | Q | I | V | T | T | A | H | Q | R | G | K | W | V | . |
. |
G | I | C | G | . |
. |
Query Conservation |   |
|
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|   |
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|   |
|
|   |   | . | . |
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|   |
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|   |
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|   |
|   |   |
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|   |
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|   |   |
|
|   |   |
|   |   |   |
|   |   |
| . | . |   |
|
|
| . | . |
Alig confidence |   |
|
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| . | . |
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| . |
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| . | . | . | . |
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| . | . |
|
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|
| . | . |
Template Conservation |   |
|
|
|   |   |
|
|   |   |   |   |   |
|
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|   |   | . |   |
|
|   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|
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|
|   |   |   |
|
|
|
|   |   |   |   |
Template Sequence |   |
V | E | T | A | R | G | A | V | C | A | A | E | I | A | A | A | D | P | T | V | G | M | M | W | G | A | E | D | L | I | A | . |
T | L | G | G | S | S | S | R | R | A | . |
. |
. |
. |
D | G | A | Y | R | D | V | A | R | H | V | R | S | T | I | L | L | A | A | S | A | F | G | R | L | A | L | D | A | V | H | L | D | I |
Template Known Secondary structure |   |
 |
| S |  |  |  |  |  | T |  |  |  |  |  |  | S | T | T |  |  |  |  |  |  |
|  |  |  |  |  |  | . |  |  | T |
| S |
| S | B |
| T | . | . | . | . | T | S |
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
|
|
| S |
| T |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  | . |  |  |
|
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|
| . | . | . | . |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |
|
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|
Template SS confidence |   |
|
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  |   |
111 | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
. | . | . | . | . | . | . | . | 150 | . | |
|
|
|
. | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . |
  |
  |   |
|
613 | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | |
. | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . |
Predicted Secondary structure |   |
. |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
| . |
|
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|
Query Sequence |   |
. |
E | L | G | G | E | S | R | Y | L | P | L | L | L | G | L | G | L | D | . |
E | L | S | M | S | S | P | R | I | P | A | V | K | S | Q |
Query Conservation |   |
. |
|   |
|   |
|
|   |   |   |
|
|
|
|
|
|
|
|   | . |   |
|
|
|
|
|   |   |
|   |   |
|
|   |   |
Alig confidence |   |
. |
|
|
|
|
|
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|
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|
|
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|
|
|
|
|
|
| . |
|
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|
|
Template Conservation |   |
  |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|
|
|   |
|
|   |   |   |
|   |   |
Template Sequence |   |
L | D | V | E | G | L | Q | E | E | A | R | D | A | A | A | V | G | F | D | V | T | V | C | I | H | P | S | Q | I | P | V | V | R | K | A |
Template Known Secondary structure |   |
T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  | S | S | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
186 | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |
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