Job Description P76395 Confidence 28.80% Date Thu Jan 5 12:22:33 GMT 2012 Rank 24 Aligned Residues 181 % Identity 11% Template c3eq2A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:probable two-component response regulator; PDBTitle: structure of hexagonal crystal form of pseudomonas2 aeruginosa rssb Resolution 3.40 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		Q	I	A	W	L	N	D	Q	Q	P	L	L	S	V	F	V	A	D	G	A	G	S	V	S	Q	G	G	E	G	A	M	L	A	V	N	E	A	M	A	Y	M	S	Q	K	V	Q	G	G	E	L	G	.	.	L	N	D	V	L	A	T	N	M	V	L	T	I	R	Q	R	L	F	A	E	A	E	A	K	E	L	A
Query Conservation																																																					.	.
Alig confidence																																																					.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.
Template Sequence		F	V	D	Y	F	R	V	D	E	R	R	V	A	F	Y	L	A	D	V	S	G	H	G	A	S	S	A	F	V	T	V	L	L	K	F	X	T	T	R	L	L	Y	E	S	R	R	N	G	T	L	P	E	F	K	P	S	E	V	L	A	H	I	N	R	G	L	I	N	T	.	.	.	.	.	.	.	.	.	K	L
Template Known Secondary structure									T	T	T										S	S		S	T	T	T																		S		S	S		S	S	S	S																	T	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.										.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	D	F	A	C	T	F	L	G	L	I	S	S	P	D	G	T	L	I	M	Q	I	G	D	G	G	V	V	V	D	L	G	H	G	L	Q	L	P	L	T	P	M	A	G	E	Y	A	N	M	T	H	F	I	T	D	E	D	A	V	S	R	L	E	T	F	T	S	T	G	R	A	H	K	V	A	A	F	T	D
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	H	V	T	X	L	G	G	V	I	D	L	E	K	N	S	L	T	Y	S	I	G	G	H	L	P	L	P	V	L	F	V	E	G	Q	A	G	Y	L	E	G	R	P	V	G	L	F	D	D	A	D	D	.	.	.	.	.	.	.	.	.	.	.	R	V	X	E	L	P	P	S	F	S	L	S	L	F	S	D
Template Known Secondary structure														T	T	T	T								S	S	S								T	T											S								.	.	.	.	.	.	.	.	.	.	.							S	S							S	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.												.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		G	I	Q	R	L	A	L	N	M	L	D	N	S	P	H	V	P	F	F	T	P	F	F	N	G	L	A	A	A	T	Q	E	Q	L	D	L	L	P	E	L	L	K	Q	F	L	S	S	P	A	V	N	E	R	T	.	D	D	D	K	T	L	A	L	A
Query Conservation																																																								.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	L	D	T	L	K	E	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	L	P	E	Q	V	A	A	A	G	L	D	G	L	R	Q	V	F	G	L	A	N	L	A	E	D	D	I	A	L	L	V	L
Template Known Secondary structure								S	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S						T	T										S				S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.																					.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions