Job Description P76395 Confidence 99.96% Date Thu Jan 5 12:22:33 GMT 2012 Rank 11 Aligned Residues 215 % Identity 15% Template c2iq1A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein phosphatase 2c kappa, ppm1k; PDBTitle: crystal structure of human ppm1k Resolution 2.25 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	Y	A	S	T	V	G	T	S	H	I	S	A	D	L	P	C	Q	D	A	C	Q	M	Q	I	A	W	L	N	D	Q	Q	P	L	L	S	V	F	V	A	D	G	A	G	S	V	S	Q	G	G	E	G	A	M	L	A	V	N	E	A	M	A	Y	M	S	Q	K	V	Q	G	G	E	L	G	L	N	D	V	L
Query Conservation
Alig confidence										.	.	.	.	.														.	.	.	.																																									.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.														.	.	.	.																																									.	.	.	.	.	.	.
Template Sequence		V	G	C	A	S	Q	I	G	.	.	.	.	.	K	R	K	E	N	E	D	R	F	D	F	A	Q	.	.	.	.	L	T	D	E	V	L	Y	F	A	V	Y	D	G	H	G	G	P	A	A	A	D	F	C	H	T	H	M	E	K	C	I	M	D	L	L	P	K	E	K	N	.	.	.	.	.	.	.	L	E	T
Template Known Secondary structure										.	.	.	.	.	S	S	S	S										.	.	.	.		S	S	S											S	S	T																		T	T	T				.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.														.	.	.	.																																									.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.						.	.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.								.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	T	N	M	V	L	T	I	R	Q	R	L	F	A	E	A	E	A	K	E	L	A	V	R	D	F	A	C	T	F	L	G	L	I	S	S	P	D	G	T	L	I	M	Q	I	G	D	G	G	V	V	V	D	L	G	H	G	L	Q	L	P	L	T	P	M	A	G	E	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	T	L	A	F	L	E	I	D	K	A	F	S	S	H	A	R	L	A	T	L	L	T	S	G	T	T	A	T	V	A	L	L	R	D	G	I	E	L	V	V	A	S	V	G	D	S	R	A	I	L	C	R	K	G	K	P	M	K	L	T	I	D	H	T	P	E	R	K	D	E	K	E	R	I	K	K	C	G
Template Known Secondary structure																							G	G	G												T	T	T								S	S								T	T											T	T	S										T	T
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
																	153	.	.	.	.	.	.	160	.	.	.	.									.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	N	M	T	H	F	I	T	D	E	D	.	.	.	.	.	.	.	.	A	V	S	R	L	E	T	F	T	S	T	G	R	A	H	K	V	A	A	F	T	D	G	I	Q	R	L	A	L	N	M	L	D	N	S	P	H	V	P	F	F	T	P	F	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	F	V	A	W	N	S	L	G	Q	P	H	V	N	G	R	L	A	M	T	R	S	I	G	D	L	D	L	K	T	S	G	V	I	A	E	P	E	T	K	R	I	K	L	H	H	A	D	D	S	F	L	V	L	T	T	D	G	I	N	F	M	V	N	S	Q	E	.	.	.	.	.	.	.	.	.	.	.	I	C
Template Known Secondary structure								T	T	S					T	T	T	B	S		S	B					G	G	G	T	T	T	T		B												T	T	T													T	T						.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.												.	310
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	L	A	A	A	T	Q	E	Q	L	D	L	L	P	E	L	L	K	Q	F	L	S	S	P	A	V	N	E	R	T	D	D	D	K	T	L	A	L	A	L	W	A
Query Conservation
Alig confidence										.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.
Template Sequence		D	F	V	N	Q	C	H	D	.	.	.	.	.	.	P	N	E	A	A	H	A	V	T	E	Q	A	I	Q	Y	G	T	E	D	N	S	T	A	V	V	V	P	F	G
Template Known Secondary structure						T	S	S	S	.	.	.	.	.	.															T	T			S										T
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.							.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions