Job Description P09391 Confidence 10.73% Date Thu Jan 5 11:02:20 GMT 2012 Rank 34 Aligned Residues 57 % Identity 11% Template c3gr0D_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:protein prgh; PDBTitle: periplasmic domain of the t3ss inner membrane protein prgh from2 s.typhimurium (fragment 170-362) Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	I	T	S	F	A	N	P	R	V	A	Q	A	F	V	D	Y	M	A	T	Q	G	V	I	L	T	I	Q	Q	H	N	Q	S	D	V	W	L	A	D	E	S	Q	A	E	R	V	R	A	E	L	A	R	F	L	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	I	T	L	M	D	D	V	T	A	A	G	Q	A	E	A	G	L	K	Q	Q	A	L	P	Y	S	R	R	N	H	K	G	G	V	T	F	V	I	Q	G	A	L	D	D	V	E	I	L	R	A	R	Q	F	V	D	S
Template Known Secondary structure																							T	T									T	T								S
Template Predicted Secondary structure
Template SS confidence
		289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions