Job Description P09391 Confidence 12.83% Date Thu Jan 5 11:02:20 GMT 2012 Rank 29 Aligned Residues 127 % Identity 10% Template c1yq3C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:succinate dehydrogenase cytochrome b, large subunit; PDBTitle: avian respiratory complex ii with oxaloacetate and ubiquinone Resolution 2.20 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		V	R	A	E	L	A	R	F	L	E	N	P	A	D	P	R	Y	L	A	A	S	W	Q	A	G	H	T	G	S	G	L	H	Y	R	R	Y	P	F	.	.	F	A	A	L	R	E	R	A	G	P	V	T	W	V	M	M	I	A	C	V	V	V	F	I	A	M	Q	I	L	G	D	Q	E	V	M	L	W	L	A	W
Query Conservation																																								.	.
Alig confidence										.	.	.	.	.	.	.	.																							.	.
Template Conservation										.	.	.	.	.	.	.	.
Template Sequence		A	K	E	E	M	A	R	F	.	.	.	.	.	.	.	.	W	E	K	N	T	K	S	S	R	P	L	S	P	H	I	S	I	Y	K	W	S	L	P	M	A	M	S	I	T	H	R	G	T	G	V	A	L	S	L	G	V	S	L	F	S	L	A	A	L	L	L	P	E	Q	F	P	H	Y	V	A	V	V	K	S
Template Known Secondary structure										.	.	.	.	.	.	.	.						T	S								T	T	T																																			S	S											T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.									.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		126	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.																	.	.
Query SS confidence						.	.																	.	.
Query Sequence		P	F	D	P	.	.	T	L	K	F	E	F	W	R	Y	F	T	H	A	L	M	H	.	.	F	S	L	M	H	I	L	F	N	L	L	W	W	W	Y	L	G	G	A	V	E	K	R	L	G	S	G	K	L	I	V	I	T	L	I	S	A	L	L	S	G	Y	V
Query Conservation						.	.																	.	.
Alig confidence						.	.																	.	.											.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.
Template Sequence		L	S	L	S	P	A	L	I	Y	S	A	K	F	A	L	V	F	P	L	S	Y	H	T	W	N	G	I	R	H	L	V	W	D	M	.	.	.	.	.	.	G	K	G	F	K	L	S	Q	V	E	Q	S	G	V	V	V	L	I	L	T	L	L	S	S	A	G	I
Template Known Secondary structure		T																																	T	.	.	.	.	.	.	T		S		S
Template Predicted Secondary structure																																				.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110							.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions