Job Description P0A814 Confidence 28.57% Date Thu Jan 5 11:06:37 GMT 2012 Rank 103 Aligned Residues 89 % Identity 15% Template c3n4qA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:terminase subunit ul89 protein; PDBTitle: human cytomegalovirus terminase nuclease domain, mn soaked Resolution 3.20 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		I	D	P	G	S	R	V	T	G	Y	G	V	I	R	Q	V	G	R	Q	L	S	Y	L	G	S	G	C	I	R	T	K	V	D	D	L	P	S	R	L	K	L	I	Y	A	G	V	T	E	I	I	T	Q	F	Q	P	D	Y	.	.	.	.	F	A	I	E	Q	V	F	M	A	K	N	A	D	S	A	L	K	L	G
Query Conservation																																																											.	.	.	.
Alig confidence						.	.																																																	.			.	.	.	.						.	.	.
Template Conservation						.	.																																																	.												.	.	.
Template Sequence		L	D	P	A	.	.	G	T	G	V	A	A	V	G	A	Y	R	H	Q	F	L	I	Y	G	L	E	H	F	F	L	S	E	S	S	E	V	A	I	A	E	C	A	A	H	M	I	I	S	V	L	S	L	H	P	.	Y	L	D	E	L	R	I	A	V	E	G	.	.	.	N	T	N	Q	A	A	A	V	R	I	A
Template Known Secondary structure						.	.											T	T																																				T	.	T									B		.	.	.	S	S
Template Predicted Secondary structure						.	.																																																	.												.	.	.
Template SS confidence
		462	.	.	.			.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.		.	.	.	.	.	.	520	.	.	.	.				.	.	.	.	.	530	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	R	G	V	A	I	V	A	A	V	N	Q	E	L	P	V	F	E	Y	A
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		C	L	I	R	Q	.	.	S	V	Q	S	S	T	L	I	R	V	L	F	Y	H
Template Known Secondary structure							.	.
Template Predicted Secondary structure							.	.
Template SS confidence
		547	.	.	550	.			.	.	.	.	.	.	.	.	560	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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