Job Description P0A814 Confidence 47.84% Date Thu Jan 5 11:06:37 GMT 2012 Rank 80 Aligned Residues 57 % Identity 12% Template c3c6aA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:terminase large subunit; PDBTitle: crystal structure of the rb49 gp17 nuclease domain Resolution 1.16 Å

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		4	.	.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																								.
Query SS confidence										.	.	.	.																								.
Query Sequence		I	L	G	I	D	P	G	S	.	.	.	.	R	V	T	G	Y	G	V	I	R	Q	V	G	R	Q	L	S	Y	L	G	S	G	C	I	.	R	T	K	V	D	D	L	P	S	R	L	K	L	I	Y	A	G	V	T	E	I	I	T	Q	F	Q	P	D	Y	F	A	I	E
Query Conservation										.	.	.	.																								.
Alig confidence										.	.	.	.																								.																		.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.
Template Sequence		V	A	T	L	D	C	S	E	G	R	G	Q	D	Y	H	A	L	Q	I	I	D	I	T	E	F	P	Y	K	Q	V	A	V	Y	H	S	N	T	T	S	H	F	I	L	P	D	I	V	F	K	Y	L	M	M	.	.	.	.	.	.	.	Y	N	E	C	P	V	Y	I	E
Template Known Secondary structure										S	S	S	S											S	S	S	S										S				T	T	T												.	.	.	.	.	.	.	T	T	S						B
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.								.	.	.	450	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions