Job Description P0A814 Confidence 98.08% Date Thu Jan 5 11:06:37 GMT 2012 Rank 5 Aligned Residues 146 % Identity 18% Template c1kcfB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:hypothetical 30.2 kd protein c25g10.02 in PDBTitle: crystal structure of the yeast mitochondrial holliday2 junction resolvase, ydc2 Resolution 2.30 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.											.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																							.															.	.	.	.	.	.	.	.	.	.		.
Query SS confidence																							.															.	.	.	.	.	.	.	.	.	.		.
Query Sequence		I	L	G	I	D	P	G	S	R	V	T	G	Y	G	V	I	R	Q	V	G	R	.	Q	L	S	Y	L	G	S	G	C	I	R	T	K	V	.	.	.	.	.	.	.	.	.	.	D	.	D	L	P	S	R	L	K	L	I	Y	A	G	V	T	E	I	I	T	Q	F	Q	P	D	Y	F	A	I	E	Q	V	F	M
Query Conservation																							.															.	.	.	.	.	.	.	.	.	.		.
Alig confidence																							.															.	.	.	.	.	.	.	.	.	.		.
Template Conservation
Template Sequence		V	L	G	I	D	L	G	I	K	N	F	S	Y	C	F	A	S	Q	N	E	D	S	K	V	I	I	H	N	W	S	V	E	N	L	T	E	K	N	G	L	D	I	Q	W	T	E	D	F	Q	P	S	S	M	A	D	L	S	I	Q	L	F	N	T	L	H	E	K	F	N	P	H	V	I	L	M	E	R	Q	R	Y
Template Known Secondary structure									S	S	S										T	T	S												T	T	S	S		T	T									S																						S
Template Predicted Secondary structure
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.											.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	N	A	D	S	A	L	K	L	G	Q	A	R	G	V	A	I	V	A	A	V	N	.	.	.	.	.	.	.	.	.	.	Q	E	L	P	V	F	E	Y	A	A	R	Q	V	K	Q	T	V	V	G	I	G	S	A	E	K	S	Q	V	Q	H	M	V	R	T	L	L	K	.	.	.	.	.	.	.	.	.	.
Query Conservation																									.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																				.	.	.	.	.	.	.	.	.	.																		.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																															.	.	.	.
Template Sequence		.	.	.	.	E	W	T	L	R	V	N	M	L	E	S	M	L	Y	A	L	H	Y	A	E	K	R	N	S	I	E	Q	K	I	Q	Y	P	F	L	L	S	L	S	P	K	S	T	Y	S	Y	W	.	.	.	.	A	S	V	L	N	S	R	V	Q	M	V	K	E	L	I	D	G	Q	K	I	L	F	E	N	E	E
Template Known Secondary structure		.	.	.	.																											T	T											T	T							.	.	.	.																	T	T	S				S	S
Template Predicted Secondary structure		.	.	.	.																																															.	.	.	.
Template SS confidence
						130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
								132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	L	P	A	N	P	Q	A	D	A	A	D	A	L	A	I	A	I	T	H	C	H	V	S	Q	N	A
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	Y	K	W	N	N	G	E	F	K	K	D	D	M	A	D	S	A	L	I	A	S	G	W	M	R	W	Q	A	Q	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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