Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF48
Confidence100.00%DateThu Jan 5 11:25:09 GMT 2012
Rank7Aligned Residues126
% Identity29%Templated1vmha_
SCOP infoYjbQ-like YjbQ-like YjbQ-like
Resolution1.31

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.... .....20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 



.






























Query SS confidence 








.





































































Query Sequence  TLTLSAKSR. GFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHDYEGA
Query Conservation   
 
 
  
.    

  
       
 
  

  

  





 



 

 
  

   
  


    
 
  


Alig confidence 








.








.























































...
Template Conservation   
 
 
       


  
.   
  


  

  

  





 



 

 
  

   
  


    
 
 ... 
Template Sequence  EYSLKTSNDDQFIDITNLV. KKAVDESGVSDGMAVVFCPHTTAGITINENADPDVTRDILVNLDKVFPKVGDYKHV. . . E
Template Known Secondary structure 

SSS
.

SS


TT
S
S
SSSS


T...T
Template Predicted Secondary structure 






.
























...
Template SS confidence 















































































   6...10.........20.... .....30.........40.........50.........60.........70.........80 .
 
   85....90.........100.........110.........120.........130......
Predicted Secondary structure 


















Query SS confidence 



















































Query Sequence  DDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQ
Query Conservation 

  




 
 
 
 



  
 
 




 
 
 
 
   
 
 
 
 
 
Alig confidence 






































.











Template Conservation   
  




 
 
 
 



  
 
 




 
 
 
 
.


 
 
 
 

Template Sequence  GNSHAHIKASLMGSSQQIIIENGKLKLGTWQGIYFTEFD. GPRDRKVFVKII
Template Known Secondary structure  S

STT


TTSS.
S

Template Predicted Secondary structure 












.



Template SS confidence 



















































   82.......90.........100.........110.........120 .........130..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions