Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF48
Confidence100.00%DateThu Jan 5 11:25:09 GMT 2012
Rank6Aligned Residues133
% Identity28%Templated1vmfa_
SCOP infoYjbQ-like YjbQ-like YjbQ-like
Resolution1.46

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10..... ....20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 




.


























Query SS confidence 












.

































































Query Sequence  YQKTLTLSAKSRG. FHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHDY
Query Conservation   
  
 
 
  
 .   

  
       
 
  

  

  





 



 

 
  

   
  


    
 
  
Alig confidence 












.







.























































.
Template Conservation      
 
 
  
    


  
.   
  
 
  


 

  





 


  

 
  

   
  


        .
Template Sequence  HMKTFHLTTQSRDEMVDITSQI. ETWIRETGVTNGVAIVSSLHTTAGITVNENADPDVKRDMIMRLDEVYPWHHENDRH.
Template Known Secondary structure 



SSS
.T

SS
SSSS
S
S

TT


.
Template Predicted Secondary structure 






.
























.
Template SS confidence 















































































   0.........10.........20. ........30.........40.........50.........60.........70.......
 
   82.......90.........100.........110.........120.........130........
Predicted Secondary structure 






















Query SS confidence 
























































Query Sequence  EGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE
Query Conservation 




  




 
 
 
 



  
 
 




 
 
 
 
   
 
 
 
 
 

Alig confidence  .























































Template Conservation  .   
  




 
 
 
 



 

 
 




 
 
 
 
  
  
 
 
 



Template Sequence  . MEGNTAAHLKTSTVGHAQTLIISEGRLVLGTWQGVYFCEFDGPRTNRKFVVKLLTD
Template Known Secondary structure  .TTS

STT


TTSS


S

Template Predicted Secondary structure  .



















Template SS confidence 
























































   78.80.........90.........100.........110.........120.........130...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions