Job Description P0AF48 Confidence 3.82% Date Thu Jan 5 11:25:09 GMT 2012 Rank 54 Aligned Residues 57 % Identity 14% Template c2gfqC_ PDB info PDB header:structural genomics, unknown function Chain: C: PDB Molecule:upf0204 protein ph0006; PDBTitle: structure of protein of unknown function ph0006 from pyrococcus2 horikoshii Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.										.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		L	L	L	Q	H	T	S	A	S	L	T	L	N	E	N	.	.	.	.	.	.	.	.	.	C	D	P	T	V	R	H	D	M	E	R	F	F	L	R	T	V	P	D	N	G	N	.	.	Y	E	H	D	Y	E	G	A	D	D	M	P	S	H	I	K	S	S	M	L	G	T	S	L	V	L	P	V
Query Conservation																	.	.	.	.	.	.	.	.	.																							.	.
Alig confidence																	.	.	.	.	.	.	.	.	.																							.	.									.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.
Template Sequence		A	L	T	T	H	V	T	G	N	W	G	K	A	X	Y	G	G	K	D	E	S	F	A	V	A	I	P	S	A	X	K	L	S	L	L	K	X	S	E	L	N	D	L	G	W	T	V	C	Y	E	A	T	H	H	G	P	.	.	.	.	.	.	.	.	T	E	L	E	V	P	S	F	F	I	E	I
Template Known Secondary structure											S	S			S	S	S	S		T	T					B																		S									S		S	S		.	.	.	.	.	.	.	.					S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.									.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions