 |
Job Description | P0ADZ7 | Confidence | 27.81% | Date | Thu Jan 5 11:22:10 GMT 2012 |
Rank | 46 | Aligned Residues | 46 |
% Identity | 11% | Template | c1kqsA_ |
PDB info |
PDB header:ribosome | Chain: A: PDB Molecule:ribosomal protein l2; |
PDBTitle: the haloarcula marismortui 50s complexed with a2 pretranslocational intermediate in protein synthesis
|
Resolution | 3.10 Å |
|
  |   |
55 | . | . | . | . | 60 | |
|
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
Predicted Secondary structure |   |
 |
|
|
|
|
| . | . |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | I | A | K | G | D | . |
. |
E | V | L | T | N | G | G | L | V | G | R | V | T | K | V | A | E | N | G | Y | I | A | I | A | L | N | D | T | T | E | V | V | I | K | R | D | F | V | A | A | V |
Query Conservation |   |
  |
|
|   |
|
| . | . |   |
|
|
|   |
|
|
|   |
|   |
|
|   |
|   |
|   |   |   |
|   |
|
|
|
|   |
|   |   |
|   |
|   |
|   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |
|
|   |   |   |
|
|
|
|
|   |
|   |
|
|   |
| . |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |
|   |   |   |
|   |
|
|
|
Template Sequence |   |
E | S | S | P | G | D | G | G | K | F | A | R | A | S | G | V | N | A | Q | L | L | T | H | . |
D | R | N | V | A | V | V | K | L | P | S | G | E | M | K | R | L | D | P | Q | C | R | A | T | I |
Template Known Secondary structure |   |
| S | S | T | T | S |
|
|
| B | S |
| S | T | T |
|
|  |  |  |  |  |
| . |
| S | S |
|  |  |  |  |
| T | T | S |
|  |  |  |  |
| T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|