 |
Job Description | P0AEL3 | Confidence | 12.12% | Date | Thu Jan 5 11:23:37 GMT 2012 |
Rank | 33 | Aligned Residues | 25 |
% Identity | 24% | Template | c3h0gE_ |
PDB info |
PDB header:transcription | Chain: E: PDB Molecule:dna-directed rna polymerases i, ii, and iii |
PDBTitle: rna polymerase ii from schizosaccharomyces pombe
|
Resolution | 3.65 Å |
|
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
. | . | . | . | 50 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | M | L | P | G | S | S | F | N | V | V | R | V | A | P | L | . |
G | D | P | I | H | I | E | T |
Query Conservation |   |
|
|
|   |   |
|   |   |
|   |
|   |   |   |
|
|   | . |
|   |
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|   |
|
|
|
|   |
|   |
|   |
|   |
|   |   |
|   |
|
|   |
Template Sequence |   |
L | G | L | K | R | G | E | V | V | K | I | V | R | R | S | E | T | S | G | R | Y | N | S | Y | R | I |
Template Known Secondary structure |   |
 | T |
|
| T | T |
|  |  |  |  |  |
|
|
|
| T | T | S |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
183 | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|