Return to main results Retrieve Phyre Job Id

Job DescriptionP42625
Confidence4.37%DateThu Jan 5 12:01:56 GMT 2012
Rank19Aligned Residues12
% Identity42%Templatec3dnlG_
PDB info PDB header:viral proteinChain: G: PDB Molecule:hiv-1 envelope glycoprotein gp120; PDBTitle: molecular structure for the hiv-1 gp120 trimer in the b12-2 bound state
Resolution20.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20
Predicted Secondary structure 










Query SS confidence 











Query Sequence  RQPVKPVVAKEP
Query Conservation   

 

 
  

Alig confidence 











Template Conservation   

 







Template Sequence  DQSLKPCVKLTP
Template Known Secondary structure  S







Template Predicted Secondary structure 









Template SS confidence 











   113......120....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions