Return to main results Retrieve Phyre Job Id

Job DescriptionP42625
Confidence1.20%DateThu Jan 5 12:01:56 GMT 2012
Rank82Aligned Residues8
% Identity38%Templatec2bf1A_
PDB info PDB header:virus proteinChain: A: PDB Molecule:exterior membrane glycoprotein gp120; PDBTitle: structure of an unliganded and fully-glycosylated siv gp1202 envelope glycoprotein
Resolution4.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910......
Predicted Secondary structure 






Query SS confidence 







Query Sequence  RQPVKPVV
Query Conservation   

 

 
Alig confidence 







Template Conservation   






Template Sequence  ETSIKPCV
Template Known Secondary structure  TT

SS
Template Predicted Secondary structure 



Template SS confidence 







   95....100..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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