Return to main results Retrieve Phyre Job Id

Job DescriptionP42625
Confidence2.29%DateThu Jan 5 12:01:56 GMT 2012
Rank42Aligned Residues34
% Identity26%Templatec1rkcA_
PDB info PDB header:cell adhesion, structural proteinChain: A: PDB Molecule:vinculin; PDBTitle: human vinculin head (1-258) in complex with talin's2 vinculin binding site 3 (residues 1944-1969)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1920.........30.........40.........50..
Predicted Secondary structure 



Query SS confidence 

































Query Sequence  EPARTAKNFGYEEMLSELEAIVADAETRLAEDEA
Query Conservation 

     


















 

 



Alig confidence 

































Template Conservation    
  


 
   
  

 


 


    
   
Template Sequence  EEALKNRNFTVEKMSAEINEIIRVLQLTSWDEDA
Template Known Secondary structure  S

SS
Template Predicted Secondary structure 







Template SS confidence 

































   224.....230.........240.........250.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions