 |
Job Description | P60595 | Confidence | 98.08% | Date | Thu Jan 5 12:06:56 GMT 2012 |
Rank | 50 | Aligned Residues | 84 |
% Identity | 20% | Template | d1p80a1 |
SCOP info | Flavodoxin-like
| Class I glutamine amidotransferase-like
| Catalase, C-terminal domain
|
Resolution | 1.65 |
|
 |
  |   |
2 | . | . | . | . | |
|
|
. | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | V | V | I | L | . |
. |
. |
D | T | G | C | A | N | L | N | S | V | K | S | A | I | A | R | H | G | Y | E | P | K | V | S | R | D | P | D | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | L | L | A | D | K | L | F | L | P | G | V | G | T | A | Q | A | A | M | D | Q | V | R |
Query Conservation |   |
  |
|   |
|
| . | . | . |
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |   |
|   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
| . |
|   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
V | V | A | I | L | L | N | D | E | V | R | S | A | D | L | L | A | I | L | K | A | L | K | A | K | G | V | H | A | K | L | L | Y | S | R | M | G | E | V | T | A | D | D | G | T | V | L | P | I | A | A | T | F | A | G | A | P | S | L | T | V | D | A | V | I | V | P | C | . |
G | N | I | A | D | I | A | D | N | G | D |
Template Known Secondary structure |   |
 |  |  |  |  |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  | S | S | S | S |  |  |  |
| T | T | S |
|  |  |  |
|
|  |  | T | T | T | S |
| G | G | G |
| S |  |  |  |  |
|
| . | S |
| T |  |  |  |  | T |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |
| . |
|
|
|  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
602 | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | |
670 | . | . | . | . | . | . | . | . | . | 680 |
  |
  |   |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | R | E | L | F | D | L | I | K | A | C | T | Q | P | V | L | G | I | C | L | G | M | Q | L | L | G | R | R |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |
|   |   |   |   |   |
|   |
|   |
|
|   |   |
|   |   |
|
|   |   |
|
Template Sequence |   |
A | N | Y | Y | L | M | E | A | Y | K | H | L | K | P | I | A | L | A | G | D | A | R | K | F | K | A | T | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | G | G | G | G | G | G | G | G | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
681 | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|