 |
Job Description | P60595 | Confidence | 93.47% | Date | Thu Jan 5 12:06:56 GMT 2012 |
Rank | 85 | Aligned Residues | 69 |
% Identity | 19% | Template | d1kgsa2 |
SCOP info | Flavodoxin-like
| CheY-like
| CheY-related
|
Resolution | 1.50 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 40 | . | . | . | |
|
|
|
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  | . | . | . | . | . | . |  |
|
|
|  |  |  | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | V | V | I | L | D | T | G | C | A | N | L | N | S | V | K | S | A | I | A | R | H | G | Y | E | P | K | V | S | R | D | P | D | V | V | . |
. |
. |
. |
. |
. |
L | L | A | D | K | L | F | . |
. |
. |
. |
L | P | G | V | G | T | A | Q | A | A | M | D | Q | V | R | E | R | E | L | F | D | L | I | K | A | C | T |
Query Conservation |   |
|   |
|   |
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |
| . | . | . | . | . | . |   |   |   |
|
|
|
| . | . | . | . |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |
|   |   | . |   |   |
|   |   |   |   |   |   |
|
|   |   |   | . | . | . | . | . | . | . |   |   |
Template Sequence |   |
V | R | V | L | V | V | E | D | E | R | D | L | A | D | L | I | T | E | A | L | K | K | E | X | F | T | V | D | V | C | Y | D | G | E | E | G | X | Y | X | A | L | N | E | P | F | D | V | V | I | L | D | I | X | L | P | V | . |
H | D | G | W | E | I | L | K | S | X | R | E | S | G | . |
. |
. |
. |
. |
. |
. |
V | N |
Template Known Secondary structure |   |
|  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  |  | S |
|
| S | S | . | S |
|  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | . | . | . | . |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
| . |
|
|
|  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | |
. | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
|
|
|
|
. | . |
  |
  |   |
71 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
Q | P | V | L | G | I | C |
Query Conservation |   |
  |
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|
|
Template Sequence |   |
T | P | V | L | X | L | T |
Template Known Secondary structure |   |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
75 | . | . | . | . | 80 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|