Return to main results Retrieve Phyre Job Id

Job DescriptionP60595
Confidence100.00%DateThu Jan 5 12:06:56 GMT 2012
Rank2Aligned Residues189
% Identity34%Templated1ka9h_
SCOP infoFlavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT)
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50......... 60.........70.......
Predicted Secondary structure 

















...




Query SS confidence 


























































. . .

















Query Sequence  MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFLPGVGTAQAAMDQVRE. . . RELFDLIKACTQPVLGIC
Query Conservation 
 
 


 
     
    
   
    

     
   








           ...  
         





Alig confidence 


























































...

















Template Conservation 
 
 


 
         

   
  
        
   








             
   
        





Template Sequence  MKALLIDYGSGNLRSAAKALEAAGFSVAVAQDPKAHEEADLLVLPGQGHFGQVMRAFQESGFVERVRRHLERGLPFLGIC
Template Known Secondary structure 

SS
S
TT
SSTTS
SS
S


S
TTSSS
TTT


T
Template Predicted Secondary structure 























Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  LGMQLLGRRSEESNGVDLLGIIDEDVPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQC
Query Conservation   
 


             
     
             
                                     
  
Alig confidence 



































......





































Template Conservation   
 


             
                ......                       
              
Template Sequence  VGMQVLYEGSEEAPGVRGLGLVPGEVRRFRAGRVPQ. . . . . . MGWNALEFGGAFAPLTGRHFYFANSYYGPLTPYSLGKG
Template Known Secondary structure  TTSSTTSTT




SSSS

SSSSS......

GGGGGGTT
S



TT

Template Predicted Secondary structure 



















......















Template SS confidence 















































































   83......90.........100.........110........ .120.........130.........140.........150......
 
   158. 160.........170.........180.........190.....
Predicted Secondary structure 

.













Query SS confidence 

.



































Query Sequence  NY. GEPFTAAVQKDNFYGVQFHPERSGAAGAKLLKNFLE
Query Conservation    .    
  
      






 
   
  
   
  
Alig confidence 

.



































Template Conservation            
    
 
 




 
   
   
    
Template Sequence  EYEGTPFTALLAKENLLAPQFHPEKSGKAGLAFLALARR
Template Known Secondary structure  TT
SSSS
TTSS
Template Predicted Secondary structure 














Template SS confidence 






































   157..160.........170.........180.........190.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions