 |
Job Description | P60595 | Confidence | 56.63% | Date | Thu Jan 5 12:06:56 GMT 2012 |
Rank | 310 | Aligned Residues | 29 |
% Identity | 14% | Template | c3tqtB_ |
PDB info |
PDB header:ligase | Chain: B: PDB Molecule:d-alanine--d-alanine ligase; |
PDBTitle: structure of the d-alanine-d-alanine ligase from coxiella burnetii
|
Resolution | 1.88 Å |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | V | V | I | L | D | T | G | C | A | N | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
N | S | V | K | S | A | I | A | R | H | G | Y | E | P | K | V | S |
Query Conservation |   |
|   |
|   |
|
|
|   |
|   |   |   |   | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   | . |
|
|   |
|   |
|   |   |
|
|
|   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |
|
Template Sequence |   |
L | H | I | S | V | L | C | . |
G | G | Q | S | T | E | H | E | I | S | I | Q | S | A | K | N | I | V | N | T | L | D | A | A | K | Y | L | I | S | V | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | . |  |
| S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| T | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | |
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|