Job Description P60595 Confidence 90.92% Date Thu Jan 5 12:06:56 GMT 2012 Rank 102 Aligned Residues 159 % Identity 13% Template c3sozC_ PDB info PDB header:structural genomics, unknown function Chain: C: PDB Molecule:cytoplasmic protein stm1381; PDBTitle: cytoplasmic protein stm1381 from salmonella typhimurium lt2 Resolution 2.60 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.											.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.										50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Query Sequence		V	K	S	A	I	A	R	H	G	Y	E	P	K	V	S	R	.	.	.	.	.	.	.	.	.	.	D	P	D	V	V	L	L	A	D	K	L	F	L	P	G	V	G	T	.	.	.	.	.	.	.	.	.	A	Q	A	A	M	D	Q	V	R	E	R	E	L	F	D	L	I	K	A	C	T	Q	P	V	L	G	I
Query Conservation																		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	S	C	L	R	Q	G	N	I	D	V	D	Y	X	P	A	H	I	V	Q	T	R	F	P	Q	T	A	E	A	L	A	C	Y	D	A	I	V	I	S	D	I	G	S	N	T	F	L	L	Q	N	R	T	F	Y	N	X	D	I	I	P	D	A	L	Q	L	I	A	D	Y	V	A	E	G	G	G	L	L	X	I
Template Known Secondary structure									S	S																	S		T	T	T	T	T	T		S						S								S																								T	T
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	L	G	M	Q	L	L	G	R	R	S	E	E	S	N	G	V	D	L	L	G	I	I	D	E	D	V	P	K	M	T	D	F	G	L	P	L	P	H	M	G	W	N	R	V	Y	P	Q	A	G	N	R	L	F	Q	G	I	E	D	G	A	Y	F	Y	F	V	H	S	Y	A	M	P	V	N	P	W	T	I	A	Q
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	G	G	Y	L	S	F	T	G	I	E	A	K	A	N	Y	K	N	T	V	L	A	E	V	L	P	V	D	X	L	D	V	D	D	R	V	E	L	P	Q	G	C	K	A	V	N	T	A	V	E	H	V	I	T	Q	P	F	S	E	W	P	P	L	L	G	Y	N	K	L	I	A	K	E	N	S	Q	V	L	A	E
Template Known Secondary structure		.		S	T	T	S	S	S		G	G	G		S		G	G	G	S	G	G	G	G	T	S	S					S	S																S	S			T	T	T	T	T		S															T	T
Template Predicted Secondary structure		.
Template SS confidence
			115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		C	N	Y	G	E	P	F	T	A	A	V	Q	.	K	D	N	F	Y	G	V
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		I	N	G	D	P	L	L	V	X	G	T	Y	H	K	G	K	V	C	C	F
Template Known Secondary structure			T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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