|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
. | . | . | . | . | 40 | . | . | . | . | |
. | . | . | . | . | 50 | . | . | . | |
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  | . | . |  |  |  |
|
|
|  |  |  |  | . |
|
|
|
|
|  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | V | V | I | L | D | T | G | C | A | N | L | N | S | V | K | S | A | I | A | R | H | G | Y | E | P | K | V | S | R | D | P | D | . |
. |
V | V | L | L | A | D | K | L | F | L | . |
P | G | V | G | T | A | Q | A | A | . |
. |
M | D | Q | V | R | E | R | E | L | F | D | L | I | K | A | C | T | Q | P | V | L | G | I |
Query Conservation |   |
  |
|   |
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   | . | . |   |
|   |   |   |
|
|
|
|
| . |
|
|
|
|   |   |   |   |   | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |   |
|
|
|
|   |   |
|   |   |   |
|
|   |
|
|   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |
|
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|
|
|
|
|
|
Template Sequence |   |
R | A | L | I | V | D | A | E | D | H | F | T | A | M | I | A | Q | Q | L | S | S | L | G | L | A | T | E | V | C | G | V | H | D | A | V | D | L | A | R | Y | D | V | V | V | M | G | P | G | P | G | D | P | S | D | A | G | D | P | R | I | A | R | L | Y | A | W | L | R | H | L | I | D | E | G | K | P | F | M | A | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| S |
| T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | T | T |
|
|
|
| G | G | G |
| S |  |  |  |  |
|
|
| S | S |
| T | T |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
446 | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . |
  |
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | L | G | M | Q | L | L | G | R | R | S | E | E | S | N | G | V | D | L | L | G | I | I | D | E | D | V | P | K | M | T | D | F | G | L | P | L | P | H | M | G | W | N | R | V | Y | P | Q | A | G | N | R | L | F | Q | G | I | E | D | G | A | Y | F | Y | F | V | H | S | Y | A | M | P | V | N | P | W | T | I | A | Q |
Query Conservation |   |
|   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|   |   |
|
|
|   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
C | L | S | H | Q | I | L | N | A | I | L | G | I | P | L | V | R | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | V | P | N | Q | G | I | Q | V | E | I | D | L | F | G | Q | R | E | R | V | G | F | Y | N | T | Y | V | A | Q | T | V | R | D | E | M | D | V | D | G | V | G | T | V | A | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | S | S |
|
|
| S |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
|
| S |  |  |  | B |
| S |
| S |  |  |  |  | T | T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
526 | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . |
  |
  |   |
157 | |
. | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | |
. | . | . | . | . | . | . | 190 | . | . | . | . | . |
Predicted Secondary structure |   |
 | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | . |
N | Y | G | E | P | F | T | A | A | V | Q | K | D | N | F | Y | G | V | Q | F | H | P | E | R | S | . |
G | A | A | G | A | K | L | L | K | N | F | L | E |
Query Conservation |   |
  | . |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|   |
| . |   |   |   |
|   |   |
|   |   |   |
|   |   |
Alig confidence |   |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |
|   |   |
|   |   |
|
|   |
|
|
|   |
Template Sequence |   |
S | R | D | P | R | T | G | E | V | H | A | L | R | G | P | T | F | S | S | M | Q | F | H | A | E | S | V | L | T | V | D | G | P | R | I | L | G | E | A | I | T |
Template Known Secondary structure |   |
 |  |
| T | T | T |
| B |  |  |  |  |  |
| S | S |  |  |  |  | S | S | B | T | T | S | T | T |
| S | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
589 | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . |
  |