Job Description P60595 Confidence 55.64% Date Thu Jan 5 12:06:56 GMT 2012 Rank 315 Aligned Residues 67 % Identity 13% Template c3iz6A_ PDB info PDB header:ribosome Chain: A: PDB Molecule:40s ribosomal protein sa (s2p); PDBTitle: localization of the small subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.									40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																	.								.	.	.	.	.	.	.	.
Query SS confidence																																	.								.	.	.	.	.	.	.	.
Query Sequence		N	V	V	I	L	D	T	G	C	A	N	L	N	S	V	K	S	A	I	A	R	H	G	Y	E	P	K	V	S	R	D	.	P	D	V	V	L	L	A	.	.	.	.	.	.	.	.	D	K	L	F	L	P	G	V	G	T	A	Q	A	A	M	D	Q	V	R	E	R	E	L	F	D	L	I	K	A	C	T	Q	P
Query Conservation																																	.								.	.	.	.	.	.	.	.
Alig confidence																																	.								.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.
Template Sequence		D	I	I	V	Q	S	A	R	P	Y	G	Q	R	A	V	L	K	F	A	Q	Y	T	G	A	H	A	I	A	G	R	H	T	P	G	T	F	T	N	Q	L	Q	T	S	F	S	E	P	R	L	L	I	L	T	D	P	R	T	.	.	.	.	.	.	.	.	.	D	H	Q	P	I	K	E	S	A	L	G	N	I	P
Template Known Secondary structure									S															T						S				T	T	T	T	T	T	T	T	T	S		S	S			S					S		T	T	T	.	.	.	.	.	.	.	.	.	T											T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.										.	.	.	.	.	.	140	.	.	.	.	.	.	.
		73	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	G	I	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	A	F	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions