Job Description P60595 Confidence 52.73% Date Thu Jan 5 12:06:56 GMT 2012 Rank 336 Aligned Residues 65 % Identity 15% Template c3eagA_ PDB info PDB header:ligase Chain: A: PDB Molecule:udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl-meso- PDBTitle: the crystal structure of udp-n-acetylmuramate:l-alanyl-gamma-d-2 glutamyl-meso-diaminopimelate ligase (mpl) from neisseria3 meningitides Resolution 2.55 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.																									.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		N	V	V	I	L	D	T	G	C	A	N	L	N	S	V	K	S	A	I	A	R	H	G	Y	E	P	K	V	S	R	D	P	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	L	A	D	K	L	F	L	.	P	G	V	G	T	A	Q	A	A	M	D	Q
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.						.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		H	I	H	I	I	G	I	G	G	T	F	X	G	G	L	A	A	I	A	K	E	A	G	F	E	V	S	G	C	D	A	K	X	Y	P	P	X	S	T	Q	L	E	A	L	G	I	D	V	Y	E	G	F	D	A	A	Q	L	D	E	F	K	A	D	V	Y	V	I	G	N	V	A	K	R	.	.	.	.	.	.	.
Template Known Secondary structure							S			S													T	T								S	S			T	T								T	T						S			G	G	G	G	G	S				S						T	T			T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	E	R	E	L	F	D	L	I	K	A	C	T	Q	P	V	L	G
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	G	X	D	V	V	E	A	I	L	N	L	G	L	P	Y	I	S
Template Known Secondary structure		.	.	T										T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions