Job Description P60595 Confidence 99.97% Date Thu Jan 5 12:06:56 GMT 2012 Rank 24 Aligned Residues 179 % Identity 18% Template c2ywdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glutamine amidotransferase subunit pdxt; PDBTitle: crystal structure of glutamine amidotransferase Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.
Query SS confidence																																																												.	.	.
Query Sequence		N	V	V	I	L	D	T	G	C	A	N	L	N	S	V	K	S	A	I	A	R	H	G	Y	E	P	K	V	S	R	D	P	D	V	V	L	L	A	D	K	L	F	L	P	G	V	G	T	A	Q	A	A	M	D	Q	V	R	E	.	.	.	R	E	L	F	D	L	I	K	A	C	T	Q	P	V	L	G	I	C	L
Query Conservation																																																												.	.	.
Alig confidence									.																																																			.	.	.
Template Conservation									.
Template Sequence		V	V	G	V	L	A	L	.	Q	G	D	F	R	E	H	K	E	A	L	K	R	L	G	I	E	A	K	E	V	R	K	K	E	H	L	E	G	L	K	A	L	I	V	P	G	G	E	S	T	T	I	G	K	L	A	R	E	Y	G	I	E	D	E	V	R	K	R	V	E	E	G	S	L	A	L	F	G	T	C	A
Template Known Secondary structure								S	.	S	S											T	T	T								S	G	G	G	G	T	T		S						S	S												T	T											T	T								T
Template Predicted Secondary structure									.
Template SS confidence
		4	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.
Query SS confidence																																																																						.	.	.
Query Sequence		G	M	Q	L	L	G	R	R	S	E	E	S	N	G	V	D	L	L	G	I	I	D	E	D	V	P	K	M	T	D	F	G	L	P	L	P	H	M	G	W	N	R	V	Y	P	Q	A	G	N	R	L	F	Q	G	I	E	D	G	A	Y	F	Y	F	V	H	S	Y	A	.	.	.	M	P	V	N	P	W	T	I	A
Query Conservation																																																																						.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		G	A	I	W	L	A	K	E	I	V	G	Y	P	E	Q	P	R	L	G	V	L	E	A	W	V	E	R	N	A	F	G	R	Q	V	E	S	F	E	.	.	.	.	.	.	.	.	.	.	E	D	L	E	V	E	G	L	G	S	F	H	G	V	F	I	R	A	P	V	F	R	R	L	G	E	G	V	E	V	L	A
Template Known Secondary structure											T	T		T	T													T	T		S			S	S	S				.	.	.	.	.	.	.	.	.	.						T	T	T									S									T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120											.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	C	N	Y	G	E	P	F	T	A	A	V	Q	K	D	N	F	Y	G	V	Q	F	H	P	E	R	S	G	A	A	G	A	K	L	L	K	N	F	L	E	M
Query Conservation
Alig confidence						.	.	.																								.	.
Template Conservation						.	.	.																								.	.
Template Sequence		R	L	G	D	.	.	.	L	P	V	L	V	R	Q	G	K	V	L	A	S	S	F	H	P	E	L	T	E	D	P	.	.	R	L	H	R	Y	F	L	E	L
Template Known Secondary structure				T	T	.	.	.								T	T					S	S		G	G	G	S	S			.	.
Template Predicted Secondary structure						.	.	.																								.	.
Template SS confidence
		153	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions