Job Description P60595 Confidence 27.94% Date Thu Jan 5 12:06:56 GMT 2012 Rank 483 Aligned Residues 71 % Identity 15% Template c2rjoA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:twin-arginine translocation pathway signal protein; PDBTitle: crystal structure of twin-arginine translocation pathway signal2 protein from burkholderia phytofirmans Resolution 2.05 Å

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		1	.	.	.	.	.							.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.													.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure								.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	V	V	I	L	.	.	.	.	.	.	D	T	G	C	A	N	L	N	S	V	K	S	A	I	A	R	H	G	Y	E	P	K	V	S	R	D	P	D	V	V	.	.	.	.	.	.	.	.	.	.	.	.	L	L	A	D	K	L	F	L	P	G	V	G	T	A	Q	A	A	M	D	Q	V	R	E	R	E	L
Query Conservation								.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.
Template Sequence		T	T	L	A	C	S	F	R	S	L	T	N	P	Y	Y	T	A	F	N	K	G	A	Q	S	F	A	K	S	V	G	L	P	Y	V	P	L	T	T	E	G	S	S	E	K	G	I	A	D	I	R	A	L	L	Q	K	T	G	G	N	L	V	L	N	V	D	P	N	D	S	A	D	A	R	.	.	.	.	.	V	I
Template Known Secondary structure									S		T	T	S																		T									T	T																T	T	T									S	S						.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.						.	.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	L	I	K	A	C	T	Q	P	V	L	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	A	C	S	K	A	G	A	Y	V	T	T	I
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions