Job Description P60595 Confidence 38.03% Date Thu Jan 5 12:06:56 GMT 2012 Rank 398 Aligned Residues 68 % Identity 21% Template c2jfzB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:glutamate racemase; PDBTitle: crystal structure of helicobacter pylori glutamate racemase2 in complex with d-glutamate and an inhibitor Resolution 1.86 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30												.	.	.	.	.	.														.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	V	V	I	L	D	T	G	C	A	N	L	N	S	V	K	S	A	I	A	R	H	G	Y	E	P	K	V	S	.	.	.	.	.	.	.	.	.	.	.	R	D	P	D	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	A	D	K	L	F	L	P	G	V	G	T	A	Q	A	A	M	D	Q
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		M	K	I	G	V	F	D	S	G	V	G	G	F	S	V	L	K	S	L	L	K	A	R	L	F	D	E	I	I	Y	Y	G	D	S	A	R	V	P	Y	G	T	K	D	P	T	T	I	K	Q	F	G	L	E	A	L	D	F	F	K	P	H	E	I	E	L	L	I	V	A	C	.	.	.	.	N	T	A	S	A	L
Template Known Secondary structure									S	S	G	G	G										T	T			S								T	T	T				T	T	S																	G	G	G	T		S							.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	E	R	E	L	F	D	L	I	K	A	C	T	Q	P	V	L	G	I
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	A	L	E	E	M	Q	K	Y	S	K	I	P	I	V	G	V
Template Known Secondary structure		.	.	.	.	T							T		S	S					S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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