Job Description P60595 Confidence 99.71% Date Thu Jan 5 12:06:56 GMT 2012 Rank 42 Aligned Residues 176 % Identity 13% Template c2h2wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homoserine o-succinyltransferase; PDBTitle: crystal structure of homoserine o-succinyltransferase (ec 2.3.1.46)2 (homoserine o-transsuccinylase) (hts) (tm0881) from thermotoga3 maritima at 2.52 a resolution Resolution 2.52 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.		.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30													.	.	.										.	.	.			.	.	.	40	.	.	.	.	.	.	.					.	.	50
Predicted Secondary structure									.							.	.																		.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.				.	.												.	.	.	.
Query SS confidence									.							.	.																		.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.				.	.												.	.	.	.
Query Sequence		M	N	V	V	I	L	D	.	T	G	C	A	N	L	.	.	N	S	V	K	S	A	I	A	R	H	G	Y	E	P	K	V	S	.	.	.	.	.	.	.	.	.	.	.	.	R	D	P	.	.	.	.	.	.	.	.	.	D	V	V	.	.	L	L	A	D	K	L	F	L	P	G	V	.	.	.	.	G	T	A
Query Conservation									.							.	.																		.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.				.	.												.	.	.	.
Alig confidence									.							.	.																		.	.	.	.	.	.	.	.	.	.	.	.				.	.	.	.	.	.	.	.	.				.	.												.	.	.	.
Template Conservation
Template Sequence		L	E	I	L	I	L	N	L	M	P	D	K	I	K	T	E	I	Q	L	L	R	L	L	G	N	T	P	L	Q	V	N	V	T	L	L	Y	T	E	T	H	K	P	K	H	T	P	I	E	H	I	L	K	F	Y	T	T	F	S	A	V	K	D	R	K	F	D	G	F	I	I	T	G	A	P	V	E	L	L	P	F
Template Known Secondary structure											S	S														S	S	S	S										S						S	S										B		G	G	G	T	T	T												S		T	T	S		G
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	A	M	D	Q	V	R	E	R	E	L	F	D	L	I	K	A	C	T	Q	P	V	L	G	I	C	L	G	M	Q	L	L	G	R	R	S	E	E	S	N	G	V	D	L	L	G	I	I	D	E	D	V	P	K	M	T	D	F	G	L	P	L	P	H	M	G	W	N	R	V	Y	P	Q	A	G	N	R	L	F
Query Conservation
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	V	D	Y	W	E	E	L	T	E	I	M	E	W	S	R	H	N	V	Y	S	T	M	F	I	C	W	A	A	Q	A	G	L	Y	Y	F	Y	G	I	P	K	Y	E	L	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	S	G	V	Y	K	H	R	V	A	K	D	S	V	L	F
Template Known Secondary structure		G	G	S	T	T																						T																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											S	S			G	G	G
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.			140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure											.	.						.	.	.	.	.
Query SS confidence											.	.						.	.	.	.	.
Query Sequence		Q	G	I	E	D	G	A	Y	F	.	.	Y	F	V	H	S	.	.	.	.	.	Y	A	M	P	V	N	P	W	T	I	A	Q	C	N	Y	G	E	P	F	T	A	A	V	Q	K	D	N	F	Y	G	V	Q	F	H	P	E	R	S	G	A	A	G	A	K	L	L	K	N
Query Conservation											.	.						.	.	.	.	.
Alig confidence											.	.						.	.	.	.	.
Template Conservation
Template Sequence		R	G	H	D	D	F	F	W	A	P	H	S	R	Y	T	E	V	K	K	E	D	I	D	K	V	P	E	L	E	I	L	A	E	S	D	E	A	G	V	Y	V	V	A	N	K	S	E	R	Q	I	F	V	T	G	H	P	E	Y	D	R	Y	T	L	R	D	E	Y	Y	R
Template Known Secondary structure		T	T			S																		T	T		T	T								T	T	T								S	S	S	S						S		T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions