 |
Job Description | P60595 | Confidence | 88.22% | Date | Thu Jan 5 12:06:56 GMT 2012 |
Rank | 127 | Aligned Residues | 44 |
% Identity | 18% | Template | c2gwrA_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:dna-binding response regulator mtra; |
PDBTitle: crystal structure of the response regulator protein mtra from2 mycobacterium tuberculosis
|
Resolution | 2.10 Å |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 40 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  | . | . | . | . | . | . |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | V | V | I | L | D | T | G | C | A | N | L | N | S | V | K | S | A | I | A | R | H | G | Y | E | P | K | V | S | R | D | P | D | V | V | . |
. |
. |
. |
. |
. |
L | L | A | D | K | L | F | L |
Query Conservation |   |
|   |
|   |
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |
| . | . | . | . | . | . |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|
|
Template Sequence |   |
Q | R | I | L | V | V | D | D | D | A | S | L | A | E | X | L | T | I | V | L | R | G | E | G | F | D | T | A | V | I | G | D | G | T | Q | A | L | T | A | V | R | E | L | R | P | D | L | V | L | L |
Template Known Secondary structure |   |
|  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
| G | G | G |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|