Job Description P60595 Confidence 89.33% Date Thu Jan 5 12:06:56 GMT 2012 Rank 110 Aligned Residues 48 % Identity 25% Template c2fu3A_ PDB info PDB header:biosynthetic protein/structural protein Chain: A: PDB Molecule:gephyrin; PDBTitle: crystal structure of gephyrin e-domain Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10																	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.										.	.	.	.	40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.								.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.								.	.	.	.	.	.	.	.	.
Query Sequence		N	V	V	I	L	D	T	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	L	N	S	V	K	S	A	I	A	R	H	G	Y	E	P	K	.	.	.	V	S	R	D	P	D	V	.	.	.	.	.	.	.	.	.	V	L	L	A	D	K	L	F	L	P	G	V	G	T
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.								.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	A	V	M	S	T	G	N	E	L	L	N	P	E	D	D	L	L	P	G	K	I	R	D	S	N	R	S	T	L	L	A	T	I	Q	E	H	G	Y	P	T	I	N	L	G	I	V	G	D	N	P	D	D	L	L	N	A	L	N	E	G	I	S	R	A	D	V	I	I	T	S	G	G	V	S
Template Known Secondary structure										T	T				T	T	S				T	T																	T	T											S																	S						S			S
Template Predicted Secondary structure
Template SS confidence
		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions