 |
Job Description | P60595 | Confidence | 93.16% | Date | Thu Jan 5 12:06:56 GMT 2012 |
Rank | 86 | Aligned Residues | 68 |
% Identity | 25% | Template | c2ayxA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:sensor kinase protein rcsc; |
PDBTitle: solution structure of the e.coli rcsc c-terminus (residues2 700-949) containing linker region and phosphoreceiver3 domain
|
Resolution | UNK |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 40 | . | . | . | . | |
|
|
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  | . | . | . | . | . | . |  |
|
|
|  |  |  |  | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | V | V | I | L | D | T | G | C | A | N | L | N | S | V | K | S | A | I | A | R | H | G | Y | E | P | K | V | S | R | D | P | D | V | V | . |
. |
. |
. |
. |
. |
L | L | A | D | K | L | F | L | . |
. |
. |
. |
P | G | V | G | T | A | Q | A | A | M | D | Q | V | R | E | R | E | L | F | D | L | I | K | A | C | T |
Query Conservation |   |
|   |
|   |
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |
| . | . | . | . | . | . |   |   |   |
|
|
|
|
| . | . | . | . |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|
|
|   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |
|
|   | . |   |
|
|   |
|
|   |   |   |
|
|   |   | . | . | . | . | . | . | . |   |   |   |
Template Sequence |   |
M | M | I | L | V | V | D | D | H | P | I | N | R | R | L | L | A | D | Q | L | G | S | L | G | Y | Q | C | K | T | A | N | D | G | V | D | A | L | N | V | L | S | K | N | H | I | D | I | V | L | S | D | V | N | M | P | N | . |
M | D | G | Y | R | L | T | Q | R | I | R | Q | L | . |
. |
. |
. |
. |
. |
. |
G | L | T |
Template Known Secondary structure |   |
|  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  |  |  | S | S |
| S | . | S |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . |  |
|
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
825 | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . | . | . | . | . | 880 | |
. | . | . | . | . | . | . | . | . | 890 | . | . | . | |
|
|
|
|
|
|
. | . | . |
  |
  |   |
71 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
Q | P | V | L | G | I |
Query Conservation |   |
  |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
Template Sequence |   |
L | P | V | I | G | V |
Template Known Secondary structure |   |
S |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
897 | . | . | 900 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|