Job Description P60595 Confidence 99.95% Date Thu Jan 5 12:06:56 GMT 2012 Rank 36 Aligned Residues 191 % Identity 16% Template c2ad5B_ PDB info PDB header:ligase Chain: B: PDB Molecule:ctp synthase; PDBTitle: mechanisms of feedback regulation and drug resistance of ctp2 synthetases: structure of the e. coli ctps/ctp complex at 2.8-3 angstrom resolution. Resolution 2.80 Å

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		1	.	.	.	.	.								.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.										.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Query Sequence		M	N	V	V	I	L	.	.	.	.	.	.	.	D	T	G	C	A	N	L	N	S	V	K	S	A	I	A	R	H	G	Y	E	P	K	V	S	R	.	.	.	.	.	.	.	.	.	D	P	D	V	V	L	L	A	D	K	L	F	L	P	G	V	G	T	A	Q	A	A	M	D	Q	V	R	E	R	E	L	F	D
Query Conservation								.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		V	T	I	G	M	V	G	K	Y	I	E	L	P	D	A	Y	K	S	V	I	E	A	L	K	H	G	G	L	K	N	R	V	S	V	N	I	K	L	I	D	S	Q	D	V	E	T	R	G	V	E	I	L	K	G	L	D	A	I	L	V	P	G	G	F	G	Y	R	G	V	E	.	.	.	G	M	I	T	T	A	R
Template Known Secondary structure									S		T	T	S	G	G	G	G														T	T																		G	G	G	G	T	T		S										S	T	T			.	.	.
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.				360	.	.	.	.	.	.
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.															.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	K	A	C	T	Q	P	V	L	G	I	C	L	G	M	Q	L	L	G	R	R	S	E	E	S	N	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	L	G	I	I	D	E	D	V	P	K	M	T	D	F	G	L	P	L	P	H	M	G	W	N	R	V	Y	P	Q	A	G	N	R	L	F
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	R	E	N	N	I	P	Y	L	G	I	C	L	G	M	Q	V	A	L	I	D	Y	A	R	H	V	A	N	M	E	N	A	N	S	T	E	F	V	P	D	C	K	Y	P	V	V	A	L	I	T	E	W	R	D	E	N	G	N	V	E	V	T	M	R	L	G	A	Q	Q	C	Q	L	V	D	D	S	L	V	R
Template Known Secondary structure						T	T							T														T	T			T	T			B	T	T	T		T	T		S			S				T	T	T				S	S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
		131	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.										150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure					.																	.	.	.	.	.	.	.	.	.																				.	.	.																	.	.
Query SS confidence					.																	.	.	.	.	.	.	.	.	.																				.	.	.																	.	.
Query Sequence		Q	G	I	.	E	D	G	A	Y	F	Y	F	V	H	S	Y	A	M	P	V	.	.	.	.	.	.	.	.	.	N	P	W	T	I	A	Q	C	N	Y	G	E	P	F	T	A	A	V	Q	.	.	.	K	D	N	F	Y	G	V	Q	F	H	P	E	R	S	G	A	.	.	A	G	A	K	L	L	K	N	F	L	E
Query Conservation					.																	.	.	.	.	.	.	.	.	.																				.	.	.																	.	.
Alig confidence					.																	.	.	.	.	.	.	.	.	.												.								.	.	.																	.	.
Template Conservation																																										.
Template Sequence		Q	L	Y	N	A	P	T	I	V	E	R	H	R	H	R	Y	E	V	N	N	M	L	L	K	Q	I	E	D	A	G	L	R	V	A	G	R	S	G	D	D	.	Q	L	V	E	I	I	E	V	P	N	H	P	W	F	V	A	C	Q	F	H	P	E	F	T	S	T	P	R	D	G	H	P	L	F	A	G	F	V	K
Template Known Secondary structure					T	S	S														G	G	G								T								T	T	T	.	T								T	T	S	S	S					S	S		G	G	G	G			T	T	T
Template Predicted Secondary structure																																										.
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.		.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions