Return to main results Retrieve Phyre Job Id

Job DescriptionP60595
Confidence92.32%DateThu Jan 5 12:06:56 GMT 2012
Rank90Aligned Residues74
% Identity18%Templatec1okjB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:hypothetical protease yeaz; PDBTitle: crystal structure of the essential e. coli yeaz2 protein by mad method using the gadolinium complex3 "dotma"
Resolution2.28 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1....... .10... ......20.........30.........40..... ....50...
Predicted Secondary structure 

.........................


.








.



Query SS confidence 







. . . . . . . . . . . . . . . . . . . . . . . . .




.































.







Query Sequence  MNVVILDT. . . . . . . . . . . . . . . . . . . . . . . . . GCANL. NSVKSAIARHGYEPKVSRDPDVVLLADKLFLP. GVGTAQAA
Query Conservation 
 
 


 .........................
    . 
    
   
    

     
   





.


     
Alig confidence 







.........................




.













.........








.







Template Conservation 
 






    



     
        
 

  
 
 
   
  
    ......... 


 


  







Template Sequence  LRILAIDTATEACSVALWNDGTVNAHFELCPREHTQRILPMVQDILTTSGTSL. . . . . . . . . TDINALAYGRGPGSFTGV
Template Known Secondary structure 

SSSTT
GGG
GGGT

G.........GG
SSS
Template Predicted Secondary structure 











.........







Template SS confidence 















































































   0.........10.........20.........30.........40.........50.. .......60.........70
 
   54.....60.........70.........80......
Predicted Secondary structure 




Query SS confidence 
































Query Sequence  MDQVRERELFDLIKACTQPVLGICLGMQLLGRR
Query Conservation          
         





 
 


   
Alig confidence 




..

















.






Template Conservation 


 
.. 




    


  
 
.
  

  
Template Sequence  RIGIG. . IAQGLALGAELPMIGVST. LMTMAQG
Template Known Secondary structure  ..TTT

.
Template Predicted Secondary structure  ..



.
Template SS confidence 
































   71.... ....80.........90... ......100
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions