Job Description P69741 Confidence 100.00% Date Thu Jan 5 12:11:49 GMT 2012 Rank 7 Aligned Residues 258 % Identity 45% Template d1yq9a1 SCOP info HydA/Nqo6-like HydA/Nqo6-like Nickel-iron hydrogenase, small subunit Resolution 2.35

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	R	P	P	V	I	W	I	G	A	Q	E	C	T	G	C	T	E	S	L	L	R	A	T	H	P	T	V	E	N	L	V	L	E	T	I	S	L	E	Y	H	E	V	L	S	A	A	F	G	H	Q	V	E	E	N	K	H	N	A	L	E	K	Y	K	G	Q	Y	V	L	V	V	D	G	S	I	P	L	K	D
Query Conservation
Alig confidence																																																																		.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		K	K	R	P	S	V	V	Y	L	H	N	A	E	C	T	G	C	S	E	S	V	L	R	T	V	D	P	Y	V	D	E	L	I	L	D	V	I	S	M	D	Y	H	E	T	L	M	A	G	A	G	H	A	V	E	E	A	L	H	E	A	I	K	G	D	.	.	.	F	V	C	V	I	E	G	G	I	P	M	G	D
Template Known Secondary structure				S									B			S								T		T	T	T	T								T							T	T	T		S	S		T											T	T	S	S	.	.	.							S	B				G	G
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		N	G	I	Y	C	M	V	A	G	E	P	I	V	D	H	I	R	K	A	A	E	G	A	A	A	I	I	A	I	G	S	C	S	A	W	G	G	V	A	A	A	G	V	N	P	T	G	A	V	S	L	Q	E	V	L	P	G	K	.	.	T	V	I	N	I	P	G	C	P	P	N	P	H	N	F	L	A	T	V	A
Query Conservation																																																												.	.
Alig confidence																																																												.	.
Template Conservation
Template Sequence		G	G	Y	W	G	K	V	G	G	R	N	M	Y	D	I	C	A	E	V	A	P	K	A	K	A	V	I	A	I	G	T	C	A	T	Y	G	G	V	Q	A	A	K	P	N	P	T	G	T	V	G	V	N	E	A	L	G	K	L	G	V	K	A	I	N	I	A	G	C	P	P	N	P	M	N	F	V	G	T	V	V
Template Known Secondary structure		G	S	T	T	S			T	T											G	G	G	S	S														G	G	G	S	T	T		T	T										G	G	G	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	I	T	Y	G	K	P	P	K	L	D	D	K	N	R	P	T	F	A	Y	G	R	L	I	H	E	H	C	E	R	R	P	H	F	D	A	G	R	F	A	K	E	F	G	D	E	G	H	R	E	G	W	C	L	Y	H	L	G	C	K	G	P	E	T	Y	G	N	C	S	T	L	Q	F	C	D	V	G	G	V
Query Conservation
Alig confidence						.																																																																								.	.
Template Conservation						.																																																																								.	.
Template Sequence		H	L	L	T	.	K	G	M	P	E	L	D	K	Q	G	R	P	V	M	F	F	G	E	T	V	H	D	N	C	P	R	L	K	H	F	E	A	G	E	F	A	T	S	F	G	S	P	E	A	K	K	G	Y	C	L	Y	E	L	G	C	K	G	P	D	T	Y	N	N	C	P	K	Q	L	F	N	Q	.	.	V	N
Template Known Secondary structure						.	T		S			B		T	T	S		B					S	S	B	T	G	G	G		T	T							T		B		S	S	T	T	S					T	T		B		G	G	G	T			G	G	G		B								B	T	T	.	.	T	B
Template Predicted Secondary structure						.																																																																								.	.
Template SS confidence
		161	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	P	V	A	I	G	H	P	C	Y	G	C	N	E	E	G	I	G	F	H	K	G	I	H	Q	L	A	N	V	E	N
Query Conservation
Alig confidence																								.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		W	P	V	Q	A	G	H	P	C	I	A	C	S	E	P	N	F	W	D	L	Y	S	.	.	.	.	.	P	F	Y	S
Template Known Secondary structure			T	T	T	T	T						T	T	S	T	T					S		.	.	.	.	.	S	T	T
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.						260	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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