 |
Job Description | P69741 | Confidence | 22.20% | Date | Thu Jan 5 12:11:49 GMT 2012 |
Rank | 59 | Aligned Residues | 60 |
% Identity | 17% | Template | c3uhjE_ |
PDB info |
PDB header:oxidoreductase | Chain: E: PDB Molecule:probable glycerol dehydrogenase; |
PDBTitle: crystal structure of a probable glycerol dehydrogenase from2 sinorhizobium meliloti 1021
|
Resolution | 2.34 Å |
|
 |
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 150 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | H | Q | V | E | E | N | K | H | N | A | L | E | K | Y | K | G | Q | Y | V | L | V | V | D | G | S | I | . |
. |
. |
. |
. |
. |
. |
P | L | K | D | N | G | I | Y | C | M | V | A | G | E | P | I | V | D | H | I | R | K | A | A | E | . |
. |
. |
. |
. |
G | A | A | A | I | I | A | I | G |
Query Conservation |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|   |   |   |   |
|   |
|   |   |   |
|
|   |   |   |   |
|   |
|   |   |
|   |   | . | . | . | . | . |
|
|   |   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   | . |
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
Template Sequence |   |
R | A | G | E | I | D | K | L | A | A | Y | L | A | P | L | . |
G | K | R | A | L | V | L | I | D | R | V | L | F | D | A | L | S | E | R | I | S | L | D | I | R | F | E | R | F | G | G | E | C | C | T | S | E | I | E | R | V | R | K | V | A | I | E | H | G | S | D | I | L | V | G | V | G |
Template Known Secondary structure |   |
| T | T | G | G | G | G |  |  |  |  |  | T | T | T | . |
| S |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|