Job Description P69741 Confidence 100.00% Date Thu Jan 5 12:11:49 GMT 2012 Rank 2 Aligned Residues 267 % Identity 48% Template c3myrE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:hydrogenase (nife) small subunit hyda; PDBTitle: crystal structure of [nife] hydrogenase from allochromatium vinosum in2 its ni-a state Resolution 2.10 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	R	P	P	V	I	W	I	G	A	Q	E	C	T	G	C	T	E	S	L	L	R	A	T	H	P	T	V	E	N	L	V	L	E	T	I	S	L	E	Y	H	E	V	L	S	A	A	F	G	H	Q	V	E	E	N	K	H	N	A	L	E	K	Y	K	G	Q	Y	V	L	V	V	D	G	S	I	P	L	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	R	P	S	V	I	W	L	S	F	Q	E	C	T	G	C	T	E	S	L	T	R	A	H	A	P	T	L	E	D	L	I	L	D	F	I	S	L	D	Y	H	H	T	L	Q	A	A	S	G	E	A	A	E	A	A	R	L	Q	A	M	D	E	N	R	G	Q	Y	L	V	I	V	D	G	S	I	P	G	P	D
Template Known Secondary structure				S									B			S											S	S									T							T	T	T		S	S																T	T	T	T							S	B				T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		126		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		N	.	G	I	Y	C	M	V	A	G	E	P	I	V	D	H	I	R	K	A	A	E	G	A	A	A	I	I	A	I	G	S	C	S	A	W	G	G	V	A	A	A	G	V	N	P	T	G	A	V	S	L	Q	E	V	L	P	G	K	T	V	I	N	I	P	G	C	P	P	N	P	H	N	F	L	A	T	V	A	H
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		A	N	P	G	F	S	T	V	A	G	H	S	N	Y	S	I	L	M	E	T	V	E	H	A	A	A	V	I	A	V	G	T	C	A	A	F	G	G	L	P	Q	A	R	P	N	P	T	G	A	M	S	V	M	D	L	V	R	D	K	P	V	I	N	V	P	G	C	P	P	I	P	M	V	I	T	G	V	I	A	H
Template Known Secondary structure		S		G	G	G	S			T	T												T	T		S													T	G	G	G	S	T	T		T	T											S	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	T	Y	G	K	P	P	K	L	D	D	K	N	R	P	T	F	A	Y	G	R	L	I	H	E	H	C	E	R	R	P	H	F	D	A	G	R	F	A	K	E	F	G	D	E	G	H	R	E	G	W	C	L	Y	H	L	G	C	K	G	P	E	T	Y	G	N	C	S	T	L	Q	F	C	D	V	G	G	V	W
Query Conservation
Alig confidence																																																																													.
Template Conservation																																																																													.
Template Sequence		Y	L	V	F	G	R	L	P	E	L	D	G	Y	G	R	P	L	A	F	Y	G	Q	S	I	H	D	R	C	Y	R	R	P	F	Y	D	K	G	L	F	A	E	S	F	D	D	E	G	A	K	Q	G	W	C	L	Y	R	L	G	C	K	G	P	T	T	Y	N	A	C	A	T	M	K	W	N	D	.	G	T	S	W
Template Known Secondary structure						S	S				B		T	T	S		B					S	S	B	G	G	G	T		T	T						T	T		B		S	S	S	S	S					T	T		B		G	G	G	T			G	G	G		B		S	T	T	T	T		B	T	T	.	T	T	B
Template Predicted Secondary structure																																																																													.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.		.	.	240	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	A	I	G	H	P	C	Y	G	C	N	E	E	G	I	G	F	H	K	G	I	H	Q	L	A	N	V	E	N	Q
Query Conservation
Alig confidence																								.	.
Template Conservation																								.	.
Template Sequence		P	V	E	A	G	H	P	C	L	G	C	S	E	P	Q	F	W	D	A	G	G	F	.	.	Y	E	P	V	S	V	P
Template Known Secondary structure		T	T	T	T	T						T	T	S	T	T	G	G	G	S	S		T	.	.	T	S
Template Predicted Secondary structure																								.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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