Job Description P69741 Confidence 100.00% Date Thu Jan 5 12:11:49 GMT 2012 Rank 9 Aligned Residues 256 % Identity 39% Template c2wpnA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:periplasmic [nifese] hydrogenase, small subunit; PDBTitle: structure of the oxidised, as-isolated nifese hydrogenase2 from d. vulgaris hildenborough Resolution 2.04 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	P	V	I	W	I	G	A	Q	E	C	T	G	C	T	E	S	L	L	R	A	T	H	P	T	V	E	N	L	V	L	E	T	I	S	L	E	Y	H	E	V	L	S	A	A	F	G	H	Q	V	E	E	N	K	H	N	A	L	E	K	Y	K	G	Q	Y	V	L	V	V	D	G	S	I	P	L	K	D	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	P	P	V	F	W	L	Q	G	Q	G	C	T	G	C	S	V	T	L	L	N	S	V	H	P	S	I	A	D	V	L	L	K	V	I	S	L	E	F	H	P	T	V	M	A	W	E	G	E	H	A	I	E	H	M	R	K	V	A	E	K	F	K	G	K	F	F	L	V	I	E	G	S	V	P	V	E	A	D	G
Template Known Secondary structure										S	B			S								T				T	T								T							T	T	T		S																	T	T	T	T							S	B				T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		128	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.																																															.	.	.	.
Query SS confidence										.	.	.	.	.																																															.	.	.	.
Query Sequence		I	Y	C	M	V	A	G	E	.	.	.	.	.	P	I	V	D	H	I	R	K	A	A	E	G	A	A	A	I	I	A	I	G	S	C	S	A	W	G	G	V	A	A	A	G	V	N	P	T	G	A	V	S	L	Q	E	V	L	P	.	.	.	.	G	K	T	V	I	N	I	P	G	C	P	P	N	P	H	N	F
Query Conservation										.	.	.	.	.																																															.	.	.	.
Alig confidence										.	.	.	.	.																																															.	.	.	.
Template Conservation
Template Sequence		K	Y	C	I	I	G	E	A	N	H	H	E	I	S	M	V	D	A	L	K	E	F	G	P	N	A	A	A	V	L	A	V	G	T	C	A	A	Y	G	G	I	P	A	A	E	G	S	E	T	G	A	T	A	V	S	K	F	L	G	D	N	G	I	K	T	P	V	V	N	I	P	G	C	P	P	H	P	D	W	I
Template Known Secondary structure		T	T							T	T													G	G	G															T	G	G	G	S	T	T			S												T	T										S	S	S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		199	200	.	.	.	.	.	.	.	.	.	210												.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	T	V	A	H	I	I	T	Y	G	K	.	.	.	.	.	.	.	.	.	.	.	P	P	K	L	D	D	K	N	R	P	T	F	A	Y	G	R	L	I	H	E	H	C	E	R	R	P	H	F	D	A	G	R	F	A	K	E	F	G	D	E	G	H	R	E	G	W	C	L	Y	H	L	G	C	K	G	P	E
Query Conservation														.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		V	G	T	V	V	L	A	L	D	A	I	K	K	N	G	L	E	G	G	L	A	E	V	V	K	V	L	D	S	D	G	R	P	T	P	F	F	G	R	N	I	H	E	N	C	P	Y	L	D	K	Y	D	E	G	V	M	S	A	T	F	T	D	K	V	.	.	.	.	G	C	R	Y	D	L	G	C	K	G	P	M
Template Known Secondary structure																										T	T	B		T	T	S		B					S	S	B	T	G	G	G		T	T							T		B		S	S	T	T			S	.	.	.	.	S	B	S	G	G	G	T			G	G	G
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230					.	.	.	.	.	.	.	.	.	240	.	.
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	G	N	C	S	T	L	Q	F	C	D	V	G	G	V	W	P	V	A	I	G	H	P	C	Y	G	C	N	E	E	G	I	G	F	H	K	G	I	H	Q	L	A	N	V	E	N
Query Conservation
Alig confidence														.	.																									.	.	.	.	.
Template Conservation														.	.																									.	.	.	.	.
Template Sequence		T	M	A	D	C	F	E	R	K	W	N	G	.	.	G	V	N	W	C	V	Q	N	A	V	C	I	G	C	V	E	P	D	F	P	D	G	K	S	.	.	.	.	.	P	F	Y	Q
Template Known Secondary structure			B		S						B	T	T	.	.	T	T	B						S					T	T	S	T	T	T	T	G	G	G		.	.	.	.	.	S	T	T
Template Predicted Secondary structure														.	.																									.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.						.	280	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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