 |
Job Description | P69741 | Confidence | 10.53% | Date | Thu Jan 5 12:11:49 GMT 2012 |
Rank | 86 | Aligned Residues | 68 |
% Identity | 18% | Template | c2j48A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:two-component sensor kinase; |
PDBTitle: nmr structure of the pseudo-receiver domain of the cika2 protein.
|
Resolution | UNK |
|
 |
  |   |
66 | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | L | R | A | T | H | P | T | V | E | N | L | V | L | E | T | I | S | L | E | Y | H | E | V | L | S | A | A | F | G | H | Q | V | E | E | N | K | H | N | A | L | E | K | Y | K | G | Q | Y | V | L | V | V | D | G | S | I | P | L | K | D | N | G | I | Y | C | M | V | A | G | E | P | I | V | D | H | I | R | K | A | A |
Query Conservation |   |
|
|   |
|   |   |
|   |
|   |   |   |
|
|   |   |
|   |
|   |
|
|   |
|
|
|   |
|   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |
|   |   |   |
|
|   |   |   |   |
|   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   | . | . | . | . | . |   |
|
|
|
|
|   |
|   |   |
|   |   |   |   |
| . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |
|
|
Template Sequence |   |
L | L | L | E | E | E | D | E | A | A | T | V | V | C | E | M | L | T | A | A | G | F | K | V | I | W | L | V | D | G | S | T | A | L | D | Q | L | D | L | L | . |
. |
. |
. |
. |
Q | P | I | V | I | L | M | A | W | P | P | P | D | Q | S | C | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | L | L | L | Q | H | L | R |
Template Known Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
| S |  |  |  |  |  |
| S | T | T |
|
| T |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
631 | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | 690 | . | . | . | . |
  |
  |   |
146 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
E | G | A | A |
Query Conservation |   |
  |
|
|   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |   |   |   |
Template Sequence |   |
E | H | Q | A |
Template Known Secondary structure |   |
 | T |
|
|
Template Predicted Secondary structure |   |
 |  |
|
|
Template SS confidence |   |
|
|
|
|
  |   |
695 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|