Job Description P69741 Confidence 72.19% Date Thu Jan 5 12:11:49 GMT 2012 Rank 23 Aligned Residues 117 % Identity 14% Template c2fu3A_ PDB info PDB header:biosynthetic protein/structural protein Chain: A: PDB Molecule:gephyrin; PDBTitle: crystal structure of gephyrin e-domain Resolution 2.70 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		R	A	T	H	P	T	V	E	N	L	V	L	E	T	.	I	S	L	E	Y	H	E	V	L	S	A	A	F	G	H	Q	V	E	E	N	K	H	N	A	L	E	K	Y	K	G	Q	Y	V	L	V	V	D	G	S	I	P	L	K	D	N	G	I	Y	C	M	V	A	G	E	P	I	V	D	H	I	R	K	A	A	E
Query Conservation																.
Alig confidence																.														.															.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.															.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	S	N	R	S	T	L	L	A	T	I	Q	E	H	G	Y	P	T	I	N	L	G	I	V	G	D	N	P	.	D	D	L	L	N	A	L	N	E	G	I	S	R	A	.	.	.	D	V	I	I	T	S	G	G	V	S	M	G	E	K	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	L	K	Q	V	L	D
Template Known Secondary structure															T	T											S			.															.	.	.	S						S			S	S	S	S	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.															.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.		.	.	.	.	.	.	.	.	560	.	.	.	.	.				.	.	.	.	570	.	.	.	.	.	.	.	.	.													580	.	.	.	.	.	.	.
		147	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		G	A	.	.	A	A	I	I	A	I	G	S	C	S	A	W	G	G	V	A	A	A	G	V	N	P	T	G	A	V	S	L	Q	E	V	L	P	G	K	T	V	I	N	I	P	G	C	P	P	N	P	H	N	F	L	A	T	V	A	H	I	I	T
Query Conservation				.	.
Alig confidence				.	.					.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.
Template Sequence		I	D	L	H	A	Q	I	H	.	.	.	.	.	.	.	F	G	R	V	F	M	K	P	G	L	P	T	T	F	A	T	L	D	I	D	G	V	R	K	I	I	F	A	L	P	G	N	P	V	S	A	V	V	T	C	N	L	F	V	V	P	A	L
Template Known Secondary structure			T	T						.	.	.	.	.	.	.		S			S		B	S		T	T									T	T										S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.
Template SS confidence
		588	.	590	.	.	.	.	.								.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions