Return to main results Retrieve Phyre Job Id

Job DescriptionP52645
Confidence7.34%DateThu Jan 5 12:05:58 GMT 2012
Rank17Aligned Residues23
% Identity17%Templated1jb0j_
SCOP infoSingle transmembrane helix Subunit IX of photosystem I reaction centre, PsaJ Subunit IX of photosystem I reaction centre, PsaJ
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30.........40
Predicted Secondary structure 


Query SS confidence 






















Query Sequence  VPLTLLMTLGLWVPTLAGIWLPL
Query Conservation             
 
      

 
Alig confidence 






















Template Conservation 

 


 
 


 


 


 

Template Sequence  VLAAIWMTITAGILIEFNRFYPD
Template Known Secondary structure  S

Template Predicted Secondary structure 
Template SS confidence 






















   13......20.........30.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions