Job Description P52645 Confidence 3.93% Date Thu Jan 5 12:05:58 GMT 2012 Rank 69 Aligned Residues 52 % Identity 21% Template c2qtsA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:acid-sensing ion channel; PDBTitle: structure of an acid-sensing ion channel 1 at 1.9 a resolution and low2 ph Resolution 1.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	A	V	L	A	L	L	L	L	I	I	L	V	P	L	T	L	L	M	T	L	G	L	W	V	P	T	L	A	G	I	W	L	P	L	G	T	R	I	A	L	D	E	S	P	R	I	T	R	K	G	L	I	I	P	D	L	R	Y
Query Conservation
Alig confidence																												.	.	.	.	.																			.	.	.
Template Conservation																												.	.	.	.	.																			.	.	.
Template Sequence		L	K	R	V	V	W	A	L	C	F	M	G	S	L	A	L	L	A	L	V	C	T	N	R	I	Q	.	.	.	.	.	Y	Y	F	L	Y	P	H	V	T	K	L	D	E	V	A	A	T	R	.	.	.	L	T	F	P	A	V	T	F
Template Known Secondary structure																												.	.	.	.	.			T	T													S	S	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.																			.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.				.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions