Job Description P37597 Confidence 100.00% Date Thu Jan 5 11:55:44 GMT 2012 Rank 2 Aligned Residues 390 % Identity 13% Template d1pw4a_ SCOP info MFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter Resolution 3.30

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	F	L	V	W	L	A	G	L	S	V	L	G	F	L	A	T	D	M	Y	L	P	A	F	A	A	I	Q	A	D	L	Q	T	P	A	S	A	V	S	A	S	L	S	L	F	L	A	G	F	A	A	A	Q	L	L	W	G	P	L	S	D	R	Y	G	R	K	P	V	L	L	I	G	L	T	I	F	A	L	G
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		W	Q	I	F	L	G	I	F	F	G	Y	A	A	Y	Y	L	V	R	K	N	F	A	L	A	M	P	Y	L	.	V	E	Q	G	F	S	R	G	D	L	G	F	A	L	S	G	I	S	I	A	Y	G	F	S	K	F	I	M	G	S	V	S	D	R	S	N	P	R	V	F	L	P	A	G	L	I	L	A	A	A	V
Template Known Secondary structure																				T	S								T	.	T	S	S	T	T		S	S																											S
Template Predicted Secondary structure																														.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		85	.	.	.					.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		S	L	G	M	.	.	.	.	L	W	V	E	N	A	A	T	L	L	V	L	R	F	V	Q	A	V	G	V	C	A	A	A	V	I	W	Q	A	L	V	T	D	Y	Y	P	S	Q	K	V	N	R	I	F	A	A	I	M	P	L	V	G	L	S	P	A	L	A	P	L	L	G	S	W	L	L	V	H	F	S	W	Q
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.
Template Conservation
Template Sequence		M	L	F	M	G	F	V	P	W	A	T	S	S	I	A	V	M	F	V	L	L	F	L	C	G	W	F	Q	G	M	G	W	P	P	C	G	R	T	M	V	H	W	W	S	Q	K	E	R	G	G	I	V	S	V	W	N	C	A	H	N	V	G	G	G	I	P	P	L	L	F	L	L	G	M	A	W	F	N	D	W
Template Known Secondary structure													S	S	S	S																T										T	T		T	T	T																		T	S												T			S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.													.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	F	A	T	L	F	A	I	T	V	V	L	I	L	P	I	F	W	L	K	P	T	T	K	A	R	N	N	S	Q	D	G	L	T	F	T	D	L	L	R	S	K	T	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	G	N	V	L	I	Y	A	A	C	S	A	S	F	F	A	W	L	T	G	S	P	F
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	A	A	L	Y	M	P	A	F	C	A	I	L	V	A	L	F	A	F	A	M	M	R	D	T	P	Q	S	C	G	L	P	P	I	E	E	Y	K	N	D	T	A	K	Q	I	F	M	Q	Y	V	L	P	N	K	L	L	W	Y	I	A	I	A	N	V	F	V	Y	L	L	R	Y	G	I	L	D	W	S	P	T	Y
Template Known Secondary structure		T	T		T																					S	S	T	T	T				S		T	T	T						T							T	S	S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	S	E	M	G	Y	S	P	A	V	I	G	L	S	Y	V	P	Q	T	I	A	F	L	I	G	G	Y	G	C	R	A	A	L	Q	K	W	Q	G	K	Q	L	L	P	W	L	L	V	L	F	A	V	S	V	I	A	T	W	A	A	G	F	I	S	H	V	S	L	V	E	I	L	I	P	F	C	V	M	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	E	V	K	H	F	A	L	D	K	S	S	W	A	Y	F	L	Y	E	Y	A	G	I	P	G	T	L	L	C	G	W	M	S	D	K	V	F	R	G	N	R	G	A	T	G	V	F	F	M	T	L	V	T	I	A	T	I	V	Y	W	M	N	P	A	G	N	P	T	V	D	M	I	C	M	I	V	I	G	F
Template Known Secondary structure		B	T	T	B	S																																T	S	T	T																				T	T	S			T	T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure																				.																					.
Query SS confidence																				.																					.
Query Sequence		A	N	G	A	I	Y	P	I	V	V	A	Q	A	L	R	P	F	P	.	H	A	T	G	R	A	A	A	L	Q	N	T	L	Q	L	G	L	C	F	L	.	A	S	L	V	V	S	W	L	I	S	I	S	T	P	L	L	T	T	T	S	V	M	L	S	T	V	V	L	V	A	L	G	Y	M	M	Q	R	C	E	E
Query Conservation																				.																					.
Alig confidence																				.																					.
Template Conservation
Template Sequence		L	I	Y	G	P	V	M	L	I	G	L	H	A	L	E	L	A	P	K	K	A	A	G	T	A	A	G	F	T	G	L	F	G	Y	L	G	G	S	V	A	A	S	A	I	V	G	Y	T	V	D	F	F	G	W	D	G	G	F	M	V	M	I	G	G	S	I	L	A	V	I	L	L	I	V	V	M	I	G	E	K
Template Known Secondary structure				T													T	S		T	T																															S	S		S
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
		387	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	C	Q	N	H	G	N	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	H	E	Q	L	L	Q	E
Template Known Secondary structure						G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		440	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions