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Job DescriptionP37597
Confidence4.95%DateThu Jan 5 11:55:44 GMT 2012
Rank13Aligned Residues149
% Identity12%Templatec3b9yA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   254.....260.........270.........280.........290.........300.........310.........320...... ...330..
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Query Sequence  GGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFP. HATGRA
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Template Sequence  GATLATYFLSALFHKGKASIVDMANAALAGGVAIGSVCNIVGPVGAFVIGLLGGAISVVGFVFIQPMLESKAKTIDTCGV
Template Known Secondary structure  TTT


TTTTTTTTS
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TT
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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   333......340.........350.........360.........370.........380.........390.........400...
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Query Sequence  AALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH
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Template Sequence  HNLHGLPGLLGGFSAILIVPGIAVAQLTGIGI. TLALALIGGVIAGALIKLTGTTKQAYEDSHEFIHLAGP
Template Known Secondary structure  TTSTT
.TT


SSTT
GGGTSSS


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   321........330.........340.........350.. .......360.........370.........380.........390
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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