Job Description P76552 Confidence 34.31% Date Wed Jan 25 15:21:09 GMT 2012 Rank 3 Aligned Residues 150 % Identity 14% Template c3pjzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:potassium uptake protein trkh; PDBTitle: crystal structure of the potassium transporter trkh from vibrio2 parahaemolyticus Resolution 3.51 Å

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		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		G	L	D	P	I	F	M	A	P	G	D	K	P	G	E	V	M	R	A	I	E	V	I	G	S	I	S	C	V	L	L	G	.	A	Y	P	M	V	L	L	L	T	R	W	F	E	K	P	L	M	S	V	G	K	V	L	N	M	N	N	I	A	A	A	G	M	V	A	T	L	A	N	N	I	P	M	F	G	M	M
Query Conservation																																		.
Alig confidence															.	.	.																	.
Template Conservation															.	.	.
Template Sequence		G	F	S	T	H	D	A	S	M	G	Y	F	D	.	.	.	S	Y	A	I	N	L	I	T	V	V	F	L	L	I	S	A	C	N	F	T	L	H	F	A	A	F	A	S	G	G	V	H	P	K	Y	Y	W	K	D	P	E	F	R	A	F	I	F	I	Q	V	L	L	F	L	V	C	F	L	L	L	L	K	H	H
Template Known Secondary structure					S	S	T	T	G	G	G	S	S		.	.	.		T	T													T	S									T	T	T	S	T	T							T	S																								T	T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.											.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure																					.																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.																														.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	M	D	T	R	G	K	V	I	N	C	A	F	A	V	S	A	A	.	F	A	L	G	D	H	L	G	F	A	A	A	N	M	N	A	M	I	F	P	M	I	V	G	K	L	I	G	G	.	.	.	.	.	.	.	.	.	.	V	T	A	I	G	V	A	M	M	L	V	P	K	E	D	A	T	A	T	K	T
Query Conservation																					.																														.	.	.	.	.	.	.	.	.	.
Alig confidence																					.																														.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	Y	T	S	P	Y	D	A	F	D	Q	A	L	F	Q	T	V	S	I	S	T	T	A	G	F	T	T	T	G	F	A	D	W	P	L	F	L	P	V	L	L	L	F	S	S	F	I	G	G	C	A	G	S	T	G	G	G	M	K	V	I	R	I	L	L	L	T	L	Q	G	A	R	E	L	K	R	L	V	H	P
Template Known Secondary structure				S	S															T	T	T	T					S				S	S			T										T	T	S		S		T	T	S	S			S	S																						S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		403	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	E	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	V	Y	T
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		379	380	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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