Job Description P0ADA1 Confidence 55.89% Date Thu Jan 5 11:20:25 GMT 2012 Rank 48 Aligned Residues 90 % Identity 10% Template c3qi7A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of a putative transcriptional regulator2 (yp_001089212.1) from clostridium difficile 630 at 1.86 a resolution Resolution 1.86 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.											100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	L	K	Q	H	Q	P	R	W	V	L	V	E	L	G	G	N	.	.	.	.	.	.	.	.	.	.	D	G	L	R	G	F	Q	P	Q	Q	T	E	Q	T	L	R	Q	I	L	Q	D	V	K	A	A	N	A	E	P	L	L	M	Q	I	R	L	P	A	N	Y	G	R	R	Y	N	E	A	F	S	A	I	Y
Query Conservation																				.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.													.	.	.																											.
Template Conservation																																										.	.	.																											.
Template Sequence		Q	K	V	K	E	K	R	P	E	I	I	T	I	S	A	P	X	G	D	D	K	N	Q	L	S	Q	F	V	D	V	N	L	G	V	S	A	E	E	R	G	.	.	.	K	V	L	A	E	R	S	K	E	X	G	A	K	A	F	I	H	Y	A	S	T	D	D	L	K	D	.	V	N	I	A	K	R	L	E	X	I
Template Known Secondary structure									T	T	S					S	S			S									S	S												.	.	.										T	T		S								T	T	G	G	G	S	.
Template Predicted Secondary structure																																										.	.	.																											.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	L	A	K	E	F	D	V	P	L	L	P	F	F	M	E	E	V	Y	L	K	P	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	T	C	K	N	I	G	L	P	F	V	Q	V	N	T	P	N	I	N	T	E	E	D
Template Known Secondary structure								T	T												S	S	T
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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