Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADA1
Confidence8.97%DateThu Jan 5 11:20:25 GMT 2012
Rank98Aligned Residues92
% Identity13%Templatec2wvsD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:alpha-l-fucosidase; PDBTitle: crystal structure of an alpha-l-fucosidase gh29 trapped2 covalent intermediate from bacteroides thetaiotaomicron in3 complex with 2-fluoro-fucosyl fluoride using an e288q4 mutant
Resolution2.19 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120.........130......... 140.........150.........160.........170.........180.
Predicted Secondary structure 









.............













Query SS confidence 
























. . . . . . . . . . . . .









































Query Sequence  RQILQDVKAANAEPLLMQIRLPANY. . . . . . . . . . . . . GRRYNEAFSAIYPKLAKEFDVPLLPFFMEEVYLKPQWMQDDG
Query Conservation     
         

          .............               
       

               

Alig confidence 
























.............









































Template Conservation    

   
 















 

 
  
  
    
 




 

  
 
  


 
 
 
  

  
       
Template Sequence  KKWAKMAKEMGTKYVKITTKHHEGFCLWPSKYTKYTVANTPYKRDILGELVKAYNDEGIDVHFYFSVMDWSNPDYRYDIK
Template Known Secondary structure  T
S
TT

BSS

TT
S
BGGGSTT
S
TT
SS
TT
TT

SS

Template Predicted Secondary structure 













































Template SS confidence 















































































   115....120.........130.........140.........150.........160.........170.........180.........190....
 
   182.......190.........200......
Predicted Secondary structure 





Query SS confidence 
























Query Sequence  IHPNRDAQPFIADWMAKQLQPLVNH
Query Conservation 



  
    
  
   
  

  
Alig confidence 
























Template Conservation            
      
  

 
 
Template Sequence  SKEDSIAFSRFLEFTDNQLKELATR
Template Known Secondary structure  S
Template Predicted Secondary structure 







Template SS confidence 
























   195....200.........210.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions